Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1196 |
Symbol | |
ID | 6026613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1250561 |
End bp | 1251277 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641594011 |
Product | pseudouridine synthase |
Protein accession | YP_001717339 |
Protein GI | 169831357 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.939109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACTGC AGAAGTACCT GGCGGAGGCC GGCATCGCTT CGCGCCGTGC TAGCGAGGAG TTGATCCTTG CCGGGCGGGT GCGGGTTAAC GGTGAGGTGG TTCGCGAACT CGGCACCACG GTCGATTCCT CCCGGGACCG CGTGGAGGTT GACGGCCAAA AAATCCGGCC CGAGCCCAAG ATTTACGTTT TGTTGTACAA GCCCCGCGGC TACGTGACCA CGGCCCGGGA CCCCCAGGGA AGGCGCAAGG TGACCGACCT GGTGGCGGGT GCGGGCGGCC GGGTTTTCCC GGTCGGACGC CTGGACTACG ACAGCGAGGG CCTACTGTTG CTCACCAACG ACGGCGAACT GGCCTACCGT CTGACCCATC CCCGTTTCCA CGTCCCGAAG ACCTACCACG TGGTGCTGGA TCGCTCACCT GGGCCGGCGG CGTTGCGCGC CATCGCCCGC GGCGTTGAAC TGGACGACGG CCTGACAGCG CCGGCGGGAG TCCGCCTGGT GCGCCGGGAC GGCAGGGAGG CTCTGGTGGA GATGACCATC CACGAGGGCC GGAAACGCCA GGTGCGGCGG ATGTGGGCCG CCCTGGGATT TGAAGTGCAA AGGTTGAAGC GCGTCCGGAT GGCGGGCCTT GAACTGGGCG GCCTGGAACC CGGCCGCTGG CGGCACCTGC GAACGACCGA AGTGCGGGAG TTGAGGAAAC TGGTGCGGTT ACCGTAA
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Protein sequence | MRLQKYLAEA GIASRRASEE LILAGRVRVN GEVVRELGTT VDSSRDRVEV DGQKIRPEPK IYVLLYKPRG YVTTARDPQG RRKVTDLVAG AGGRVFPVGR LDYDSEGLLL LTNDGELAYR LTHPRFHVPK TYHVVLDRSP GPAALRAIAR GVELDDGLTA PAGVRLVRRD GREALVEMTI HEGRKRQVRR MWAALGFEVQ RLKRVRMAGL ELGGLEPGRW RHLRTTEVRE LRKLVRLP
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