| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1192 |
|---|
| Symbol | |
|---|
| ID | 6025433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1247372 |
|---|
| End bp | 1248466 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641594007 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001717335 |
|---|
| Protein GI | 169831353 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.050597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGG TACCGGTGAA TTGCCTTGAG CCGGGAATGC GCCTGGCGCG AGCAGTTTTG
GGCACCGGCG GCGAGGTCTA CTTGAATGCC GGTGTCACCC TGACCCAAAA ATACATTAGG
AAACTCGAAG CCATAGGCTT TTACTCCGTC TACGTGGAAG ATCGCCTGCT GGATGGGGTG
ACCGTCCAGG ACGTAATATC GGAAAAGACC AGGCGGGACG CCATAATTGA AGTCCGAAAG
GCGCTCACGG AAGTGTCCAG ACCCGGTATG AAAGCGATCA ATGTCGCTCA GGAAATCACT
GTAACGGCGG ACAGTATCGT CAGCGAACTG CTCAGAAACC CGTATGCTAC CGTTAACCTG
GTCGACATTC GCGCCGAGGG GGCTTATCTC TTTCACCACT CGGTGAACGT TTGCGTGCTT
TCGGTCCTGA CCGGAATAAA TTACGGGCTT CAAAAGGAGC AACTGGTCAA TCTTGGTGTG
GGCGCTCTAC TGCACGACGC CGGCAAGGTA CGGGTCCCGC CGGAAATCCT AAACAAACCG
GGATCGCTGA CGGATGAAGA GTTTGACCAG ATCAAGCTTC ATTGTGCTTA CGGACGAGAC
ATCCTGAAAG ACCACCCTGC GGCCAGCGTG ATCGCGTATG CTCACCACGA GCGGTATAAT
GGGGAGGGTT ATCCCCTCGG GCTCAAGGGA AGGGATATCA ACTATCTTGC TCAGATGGTC
GGGATGGCCG ACGTTTACGA CGCGCTTACC TCCGACCGCT GTTACCGGAA GGCTCATGCG
CCCCATGACG CCCTGGAATT GATCTCGGGT TCGGGGAACT GGTGGTTTGA CACCAAACTG
GTGTACAACT TCCTGTGTTG CGTGGCGGCT TATCCCACCG GAACCCTGGT CCAGCTGAGT
TCCGGAGAAA TCGGGGTGGT AGTCGATACC CCGCAGGGTT ACTCTTTCTT TCCCAACGTT
CGGGTACTGC TCAACGCCCA GGGGCAGAAG GTGCTCCCTT ACCTGCTGTC TACGGTGAAA
GAAAACCTCT GGGTTAACCG CGTCCTGGAT GACGTGGAGG TCCAAACAAT CAGAAATATG
CTGGAAACAT CCTGA
|
|---|
| Protein sequence | MRKVPVNCLE PGMRLARAVL GTGGEVYLNA GVTLTQKYIR KLEAIGFYSV YVEDRLLDGV
TVQDVISEKT RRDAIIEVRK ALTEVSRPGM KAINVAQEIT VTADSIVSEL LRNPYATVNL
VDIRAEGAYL FHHSVNVCVL SVLTGINYGL QKEQLVNLGV GALLHDAGKV RVPPEILNKP
GSLTDEEFDQ IKLHCAYGRD ILKDHPAASV IAYAHHERYN GEGYPLGLKG RDINYLAQMV
GMADVYDALT SDRCYRKAHA PHDALELISG SGNWWFDTKL VYNFLCCVAA YPTGTLVQLS
SGEIGVVVDT PQGYSFFPNV RVLLNAQGQK VLPYLLSTVK ENLWVNRVLD DVEVQTIRNM
LETS
|
|---|
| |