| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1165 |
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| Symbol | |
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| ID | 6027655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1219030 |
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| End bp | 1219716 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641593980 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001717308 |
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| Protein GI | 169831326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00020927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATACCGC TTCGCGACAC AATCCGGGCC CGTCGTTTTC CAATCGTCAC CGTTTCCATC
ATCGTGGTAA ACCTGGCGAT CTTTCTGTTC TCCATCACGC TCTCTCCCGG GGAACTGCAG
CGGTTCGTAA CTGCTTTCGG CATCGTACCC GCCCTGCAGG TTCAGATGTT CCTGCAGGCC
CCCCTGGCCC TTGACACCTG GATTCCGATG GCGACATCCA TGTTCCTCCA CGGCGGGTGG
CTGCACGTGC TGGGGAATAT GCTCTACCTG TGGGTGTTCG GGGACAACAT CGAGGACGTT
CTGGGGCGGG GGCGGTTCCT GCTGTTTTAC CTCTTGGCCG GTTTCGCGGG AGGACTGGCC
CACATCGTGA GCGCTCCCGG CTCGCTGATC CCGACTATCG GGGCATCCGG CGCGGTGGCC
GGGGTGCTGG GGGCGTACTT CATCACTTTT CCGGGTTCCC GGATCCTGGC CCTGGTTCCG
ATCCTGTTTT TTATCACTTT CGTGGAAGTC CCGGCGGTGC TGTTCCTGTT TCTGTGGATC
GGTTTCCAAC TCCTGTACGG GCTTTTGGCC ATCACCGGCC CAGCCAACAT GGTCGCGTGG
TGGGCGCACG TGGGTGGCTT CGCGGCCGGG ATGCTGCTGA TGAAGATAAT ACCGGCTGCC
AATAGGTTTC ACCGGAGAAC CCGGTAA
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| Protein sequence | MIPLRDTIRA RRFPIVTVSI IVVNLAIFLF SITLSPGELQ RFVTAFGIVP ALQVQMFLQA
PLALDTWIPM ATSMFLHGGW LHVLGNMLYL WVFGDNIEDV LGRGRFLLFY LLAGFAGGLA
HIVSAPGSLI PTIGASGAVA GVLGAYFITF PGSRILALVP ILFFITFVEV PAVLFLFLWI
GFQLLYGLLA ITGPANMVAW WAHVGGFAAG MLLMKIIPAA NRFHRRTR
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