| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1156 |
|---|
| Symbol | |
|---|
| ID | 6027542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1211876 |
|---|
| End bp | 1212799 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641593971 |
|---|
| Product | putative radical SAM protein |
|---|
| Protein accession | YP_001717299 |
|---|
| Protein GI | 169831317 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0308267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATGCAGA AGCGGTACTA CTCCTTCAGC CGGTTCTTGA AGGAGCGGTT CGGGGGCCGG
GTATACAAGA TCCCGCTGGA TGCCGGTTTC ACCTGTCCCA ACCGGGACGG AACCGTCGGC
CGGGACGGGT GCACGTTCTG TCACAACCCC AGCTTCGGCC TGTTCGCAGA CCAGGCCCTT
CCTCTGGAGG ATCAGTTGAC GGCGGCAAGT GCCCGCCTGC GCCGTCGCCA CCCGGGGCCG
TTGCGTTTTC TCGCTTATCT GCAGAACTAT ACGGGAACCT ACGGACCCCT GGACCGGCTG
AAAGCGGTCT ACGGCGCCGC CGTTGCCCAT CCGGACGTGG TGGGGCTGGC GATCGGCACC
CGGCCGGACT GCGTACCGGA CCCGGTGCTG GATTTGATTG GATCCTACGC CGCGCGGTGG
CACGTCTGGC TGGAGTACGG CCTGCAGTCG ATTCACAACC GCACCCTCGA ACGAATCAAC
CGGGGGCACA CCGCCGGGCA ATTCCTGGAC GCCGTCGCCC GGGCCCGGGG ACGGGGCATC
TTCGTCTGTG CTCACGTCAT CCTCGGCCTT CCCGGCGAAA CACCCGAAGA CACGGTCGAG
ACCGCGCGCG CCCTCACGCA GGCCGGCGTG GACGGGGTTA AGGTTCATCA CCTCCAGGTG
ATCCGGGGCA CCCCTCTGGA AGCCGAGTGG CGCTCGGGAC GAGTGGATGT GTTGTCACCA
GCCGAGTACG TGCGCTGGGC CGCCGACTTC CTGGAGCACC TGGACGCCGG GATCACCATT
CACCGGCTGG TGGGCGAGGT TTTGAACGGT GAACTCCTGC TGGCGCCGCG GTGGAACGTG
GACAAGACCA AGATTCTGGA CTGGATCGAC CAGGAACTGG AGCGGAGGGG CACCGTGCAG
GGTTCCCGTG CCGCCCCTGA ATAG
|
|---|
| Protein sequence | MMQKRYYSFS RFLKERFGGR VYKIPLDAGF TCPNRDGTVG RDGCTFCHNP SFGLFADQAL
PLEDQLTAAS ARLRRRHPGP LRFLAYLQNY TGTYGPLDRL KAVYGAAVAH PDVVGLAIGT
RPDCVPDPVL DLIGSYAARW HVWLEYGLQS IHNRTLERIN RGHTAGQFLD AVARARGRGI
FVCAHVILGL PGETPEDTVE TARALTQAGV DGVKVHHLQV IRGTPLEAEW RSGRVDVLSP
AEYVRWAADF LEHLDAGITI HRLVGEVLNG ELLLAPRWNV DKTKILDWID QELERRGTVQ
GSRAAPE
|
|---|
| |