| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1109 |
|---|
| Symbol | |
|---|
| ID | 6026545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1166971 |
|---|
| End bp | 1168389 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641593923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717252 |
|---|
| Protein GI | 169831270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00916427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA TTCGCTTTCT GCTTGAGGTA GTCCTGTTTC TGGCCAAGGG AATTTTTGAG
GTGTTCAGGT CGGTGCGCAA TATGGATGAG TTGGAAGAGC GGGTGCAGCG GTTGGTTCAA
CAGGCAGGCG GCAAAATGCT GGAGGAGGCG CTGGCACACA TTGACCTTGA GTTAAGCGGC
AAGCGGGATC CAGCCCTCAA GAACGTGGGA CAGCGGTCGC GGACCCTGGT CACCAGCTTC
GGTGAGATTA CGGTTAAGCG CCGACTGTAC CGTAACCAGA AGACCGGCGC GTACCGGTTC
CTTCTGGACG AAGCCTTGGG AATCCCTGAA CGCCAACGGG TGACACCGCG GATGACCCGT
ATGATCCTGG AGCTAGGCAC GGAGATGCCC TTCAGGCGCG CGGCCCGGGT TATGGGTTTT
CTAGTACCGG GGATTCACTG GATGACCGTC TGGTCTAAGG TTCAGGATGC TGGAGAAAAG
GCCGCCCGGG ATGCTGAGGC ACTACGCGAG GCCGTCTTTG AAGACGGTGT GGTCCCTGAA
GGCGGCAAGG AGGTTCGGGA GTTATCCATT GAAGCCGATG GTGTAGTAAT ACCCTTGCAG
CGGTCGCCCA AGGCGTTTGG TGAGATCAAG CTGTTTATCG GCTACGAGGG CAGGGAACAA
AAGACCCGGA AACTGGTGAA CCGTTACACG GTGGCCACCG CCAGGGGCAG CCGGGTGGCT
TGGGAAGACA CCGGGGCGGC CTTCGGCCAC AAGTGGGACC TTAGCAGGGT AGAGCGGATC
CGCATTGGTG GGGACGGCGC CGAGTGGATC AAACAAGGCC TGGAGATGTT CCCCGGGGCG
ACTTACCACC TTGACCCCTT CCACCTGCGC CGGCGTTTAA CCGAGGCTTT AAGTTACAGC
AGCAACGTCT ATGAAACTGT CACCGAAGGG TTAGCCGAGC TAAACCAAGA TGCGGTAGTT
TCCGCCTTGG ATCAGGCGAT TCGGGTCAAC CGGGGTGCAC GCCGTAACGG GATCATGCGG
CTTAAGGAGT ATCTCCTGGC TAACTGGCAA GGTATCGCCG CCTTGCCGGA GGGAGACCGT
TTAGGTGCGA TCGAGGGCCA GGTCCGTCAC ACCATCGCCA GGCGAACAAA GCGGATTGGG
GCGCGTTGGA GCCCGGCCGG TGCGGAACGG ATGGGACGCC TGTTAGCGGT ACGGGCTAAT
GATGAGCTGG ACAGATACGC GGTACACTCG GAACCCCGGT TCGACCTACT GAAAAAGGCT
GTCGGAGCCG AGGCAATCCA ACTGCCCAAA CGCTTCGGCA AAGATCCCGA GGCCTGGCTT
CAAGCCAACG TGCCCGCCCT TGAAGGACCG CACGCCGGAA AACACTGGGT CAAGCACATA
GTAAGAGAGA TTAGTTCACC GAGGTGGTCT ACGGTCTAA
|
|---|
| Protein sequence | MFKIRFLLEV VLFLAKGIFE VFRSVRNMDE LEERVQRLVQ QAGGKMLEEA LAHIDLELSG
KRDPALKNVG QRSRTLVTSF GEITVKRRLY RNQKTGAYRF LLDEALGIPE RQRVTPRMTR
MILELGTEMP FRRAARVMGF LVPGIHWMTV WSKVQDAGEK AARDAEALRE AVFEDGVVPE
GGKEVRELSI EADGVVIPLQ RSPKAFGEIK LFIGYEGREQ KTRKLVNRYT VATARGSRVA
WEDTGAAFGH KWDLSRVERI RIGGDGAEWI KQGLEMFPGA TYHLDPFHLR RRLTEALSYS
SNVYETVTEG LAELNQDAVV SALDQAIRVN RGARRNGIMR LKEYLLANWQ GIAALPEGDR
LGAIEGQVRH TIARRTKRIG ARWSPAGAER MGRLLAVRAN DELDRYAVHS EPRFDLLKKA
VGAEAIQLPK RFGKDPEAWL QANVPALEGP HAGKHWVKHI VREISSPRWS TV
|
|---|
| |