| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1074 |
|---|
| Symbol | |
|---|
| ID | 6027364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1130278 |
|---|
| End bp | 1131219 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641593888 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001717218 |
|---|
| Protein GI | 169831236 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCC GCAAAGTGAT TGTCCGGGTG CCGGCGACGT CGTCAAACCT GGGCCCAGGC
TTCGACTGCC TGGGTTTGGC CCTCGGACTG TATAACTTCG TGGAAATGAA AGTTGTGCCG
GAGGGCTCGG AAGTCACCGT CCAGGGTGAA GGGGCTTCCG AGATTCCGAC GGACGAATCC
AACCTGACGC TCCGGGCGGC GCGGCGGGTG TTTGATCTGA ACCGGGCGCA CCCGGCTGGC
CTGAGCCTTC GCCTGACGAA TAATATTCCC CCCGCTCGCG GGCTCGGTTC CAGTGCGGCG
GCAGTGGTCG GCGGGCTGGT CGCCGCCAAC GCCCTTTCGG GGAGCCGGCT TTCAAGTAGT
GAACTCTTGA ATCTGGCCGG GGAAATGGAC GGACACCTCG ACAACGTCGC CCCCGCATTG
CTCGGGGGCC TGACCGTGGT CGTCCCGGAC GGCACGGCGG CGCTCGGTCT GCGCCTGGAG
CCACCCGCCG GACTCTTGGC GGTGGCCGCC GTCCCCGCCG TCAACGTTTA CACCTCCCGG
GCCCGGGCGG TTCTGCCGCG CGAGGTTCCG TTTGCGGATG CGGTGTTCAA TCTGGGGCGG
GTGGCGCTCC TGGTCGGGGC CCTGACGGAG GGGCGGTTCG AGTTTTTGGC CTCCGCCATG
GCCGACCGCC TGCACCAAAA GTATCGGGAA CACCTCGTTC CCGGATTGAC CGGCGTTATT
GGCGCCGCCC TGAAAGCGGG CGCTCTAGGG GCGGCGCTGA GCGGTTCCGG ACCCACCGTG
ATCGCTCTGA CGAACGATCC CGAAAAAGCG GTTCCCATCG CCGCGGGGAT GCGGGAGGCT
CTGGGCAAAC TCGGGCTGTC GGCGTGGACG CCGACCCTGG TGCCGGACCG AGAGGGCGCG
TGTACGGTGG AGACTGCGGA CGGAGGCGCG ATATGCTCGT AG
|
|---|
| Protein sequence | MSGRKVIVRV PATSSNLGPG FDCLGLALGL YNFVEMKVVP EGSEVTVQGE GASEIPTDES
NLTLRAARRV FDLNRAHPAG LSLRLTNNIP PARGLGSSAA AVVGGLVAAN ALSGSRLSSS
ELLNLAGEMD GHLDNVAPAL LGGLTVVVPD GTAALGLRLE PPAGLLAVAA VPAVNVYTSR
ARAVLPREVP FADAVFNLGR VALLVGALTE GRFEFLASAM ADRLHQKYRE HLVPGLTGVI
GAALKAGALG AALSGSGPTV IALTNDPEKA VPIAAGMREA LGKLGLSAWT PTLVPDREGA
CTVETADGGA ICS
|
|---|
| |