| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1050 |
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| Symbol | |
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| ID | 6025775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1104452 |
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| End bp | 1107679 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641593862 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001717194 |
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| Protein GI | 169831212 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.558692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGACT TTGTCCATCT GCACACCCAC ACCGAATACA GCTTGCTGGA CGGGGCGGCC
CGCATCAAAG ACCTAGTCCG GCGGGCGGCT GAATTTGGTA TGCCCGCCCT GGCGATTACG
GACCACGGGA CCATGTTCGG GGTGGTCGAG TTTTACAAGG CCTGCCGGAA CGCGGGTGTC
AAGCCGGTCA TCGGCTGCGA GGTCTACGTG GCACCGCGCA CCCGGCACGA CCGCCAGTCC
GGCATTGACG ACAAGCTGGC GCACCTGGTG CTCCTGGCCG AGAACGAGCG GGGTTACAGG
AACCTGCTCC GACTGGTCTC GCTTTCGTTT ACAGAAGGTT TTTATTACAA ACCCCGGATC
GACCGGGAGA TTCTGGCGAC ACACCGGGAG GGCCTGATCG CCCTGAGCGC GTGCTTGGCG
GGAGAGATCC CGGAACTGAT ACTGGCCGGG AAGCCGGACC GAGCCCTGGA AACAGCCGCT
GAATACCGTG ACCTCTTCGG GAAAAACTTC TACCTGGAAC TCCAGGATCA CGGCCTGCCG
GGACAGTCAG TCGTGAACCG TGGCCTGGTC GATATTGGCA AACGGCTGGG GATTGAGCTG
GTAGCCACCA ACGACGTCCA CTACGTGGAG CGGGAACAGG CGGAAAACCA GGACATCCTC
CTGTGTATCC AGACGGGGAA GACGGTGCAC GATGCCGGGC GGCTGCGGTT TGAGGGCGAC
CAATTCTATT TCAAGAGCGG GGGCGAAATG GCCCGCCTGT TTGCGGAGTT GCCCGCAGCC
TTGGCGAACA CCCGGCTGAT CGCCGAACGC TGCAACCTCA CCCTCGACTT TGAAACGCTC
CACCTACCCG AATACCGGGT ACCGCCCAAC TACGATGCGG ACACCTACCT GGCCGAGTTG
TGCCACCAGG GTCTCGCGCG GCGTTATTCC CCGGTCAGCG ATGACATCCG CCGCCGGCTC
GACTACGAGC TGAGGGTCAT CGCGGAGATG AAGTACAGTT CCTACTTTCT AATCGTTTGG
GATTTCATCC GGTTTGCCCG TGAAAAGGGC ATTCTAGTGG GGCCGGGCCG GGGTTCGGCG
GCCGGCAGCC TAGTGGCCTA TTCCCTCGGG ATCACGAACA TCGACCCCCT GGCTTACGGC
CTGCTGTTCG AACGGTTCCT GAATCCCGAG CGGATCTCCC TGCCGGACAT CGACAGCGAC
TTCTGTTTTG AACGCCGGGG GGAAGTCATC GACTACGTGT TCGAAAAATA CGGCCGCGAC
TGCGTGGCCC AGATCATCAC CTTCGGGACC ATGGCCGCCC GCGCCGCCGT GCGCGACGTG
GGGCGGGCGC TGGGGCTGCC CTATGCCGAG GTGGACCGGA TCGCGAAGCT CATCCCCGGC
GAACCGGGGA TGAGCATTGA AAAAGCGCTT GAGCGATCAC CCGAACTTGC CGAACTGTAC
GAGCGGGATG AAAACGTGCG CAAGGTGCTT GAGGCGGCCC GTGCCCTGGA AGGGATGCCC
CGGCACGCGT CCATACACGC CGCGGGGGTG GTGATCGCCA AAGAGAAGCT CACCAACTAC
GTCCCGCTGT ACCGCACTTC GGACGGGGTA GTGGCCACCC AGTTCTCCAT GGAAGCCATC
GAGGAGCTTG GTCTTCTGAA AATGGACCTT TTGGGCTTGC GCACACTGAC GGTGATCGGG
GACACGGTGG AATTGATCCG GCGTCACCGG GGGCAGAAGC TCGAGATGGA GACCATCCCG
CTGGACGACC CGGCGACTTA CGATCTCCTG GGACGCGGGG ATACCGCTGG CGTTTTTCAG
CTGGAGTCCA GCGGGATGCG CAGCATTCTA CGCGAACTCC GCCCGGAGGT TTTTGAAGAC
GTGATCGCCC TGGTGGCCCT GTACCGACCC GGACCCCTGG GCAGCAGGAT GGTTGAGGAT
TTCATCAAAC GCAAGCACGG CAAGACCGAG GTGCAGTACC TCCACCCGAA GTTAAGGCCG
ATTTTGAAGG ACACCTACGG GGTAATCCTG TACCAGGAAC AGGTAATGCG CATTGCCAGC
GACCTGGCCG GTTTCAGTCT CGGGGAGGCG GACCTCTTGC GCCGGGCTAT GGGCAAGAAG
AAGCCCGAAA TCATCGCCGG GTTGCGCGAT CAATTCCTGG AGGGCGCCAC GGCGCACGGG
GTGGACCCGG CGGTGGCCGG GCAGATTTTC GACCTGATGG CCTATTTCGC CGGCTACGGC
TTCAACAAGT CCCACAGCGC CGCCTACGCG CTGATTGCGT ACCAGACCGC CTACCTGAAG
GCGAATTACC CGATCGAGTA TATGGCGGCA CTGTTGACCT CTGTCAGGGA TAGTCCGGAG
AAGGTCTCCA GCTACGTGGA GGAGTGCCGG CGCCTGGGGA TCGAGGTGCT CCCGCCGGAC
GTGAATGAAA GCCGCAAGGA CTTCACGGTG GTGGGTGACA AGATCAGGTT TGGTTTGGCC
GGGGTAAGGA ACGTGGGAGA GGCGGCGGTG AACGCGGTCA TCGAGACCCG CGAACGGAAC
GGTCCGTTCA GGAGCCTGCC GGATTTCTGC TCCCGGTTGG ATGGAAAGGT GGTCAACAAA
CGAATGGTGG AGAGCCTGAT CCGGGCCGGC GCTTTTTCCA GCCTCGGTTT CCGGAGGACG
CAGCTTCTGG CCGTGATGGA CGAGGCTTTG AGCTTCTCCC AACGATTGCA GAAGGAAAAG
GAATCAGGCC AGTTGAGCCT CTTCGGGGAC TGGGGGGATT TCGGGGGGGA GGGAACGGCG
GCGGCCGCTC CGGAAATAGT GGTGCCGCAC CTGGCGGAGT TCGAGCGCCA CGAGATTCTG
GCCATGGAAA AGGAAATGCT CGGGCTATAC TTAAGCGGTC ACCCCCTGCA GGAGTTCAAG
GACACCTTGC GCCGCCTGAC GACGGTTAAT GCCGTGGAGA TTCCGGAGCT GAACCCCGGG
CAGCAGGTCA TCCTCGGTGG GCTGGTGGTT GGGTTGAAGA CGATCACCAC CCGCAAAGGG
GAGCCGATGT GTTTCTTGAA CCTGGAGGAC CTGACGTCAC GCGCCGAGAT CGTAATTTTC
CCCAGGGTCT ATGCCCGTTT CCGGCACCTG TTGCGGCCGG ACGCGGTGAT ACTGGTCAAC
GGCACCGTGA ATAATAACGG GGAAGGGAAC AAGATCGTGG GAGACTATAT CACGGACCTC
GAACCGGGCG GTCCTGACCT GCTCGAGAAC CACCCGTTCG GGGGCTGA
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| Protein sequence | MTDFVHLHTH TEYSLLDGAA RIKDLVRRAA EFGMPALAIT DHGTMFGVVE FYKACRNAGV
KPVIGCEVYV APRTRHDRQS GIDDKLAHLV LLAENERGYR NLLRLVSLSF TEGFYYKPRI
DREILATHRE GLIALSACLA GEIPELILAG KPDRALETAA EYRDLFGKNF YLELQDHGLP
GQSVVNRGLV DIGKRLGIEL VATNDVHYVE REQAENQDIL LCIQTGKTVH DAGRLRFEGD
QFYFKSGGEM ARLFAELPAA LANTRLIAER CNLTLDFETL HLPEYRVPPN YDADTYLAEL
CHQGLARRYS PVSDDIRRRL DYELRVIAEM KYSSYFLIVW DFIRFAREKG ILVGPGRGSA
AGSLVAYSLG ITNIDPLAYG LLFERFLNPE RISLPDIDSD FCFERRGEVI DYVFEKYGRD
CVAQIITFGT MAARAAVRDV GRALGLPYAE VDRIAKLIPG EPGMSIEKAL ERSPELAELY
ERDENVRKVL EAARALEGMP RHASIHAAGV VIAKEKLTNY VPLYRTSDGV VATQFSMEAI
EELGLLKMDL LGLRTLTVIG DTVELIRRHR GQKLEMETIP LDDPATYDLL GRGDTAGVFQ
LESSGMRSIL RELRPEVFED VIALVALYRP GPLGSRMVED FIKRKHGKTE VQYLHPKLRP
ILKDTYGVIL YQEQVMRIAS DLAGFSLGEA DLLRRAMGKK KPEIIAGLRD QFLEGATAHG
VDPAVAGQIF DLMAYFAGYG FNKSHSAAYA LIAYQTAYLK ANYPIEYMAA LLTSVRDSPE
KVSSYVEECR RLGIEVLPPD VNESRKDFTV VGDKIRFGLA GVRNVGEAAV NAVIETRERN
GPFRSLPDFC SRLDGKVVNK RMVESLIRAG AFSSLGFRRT QLLAVMDEAL SFSQRLQKEK
ESGQLSLFGD WGDFGGEGTA AAAPEIVVPH LAEFERHEIL AMEKEMLGLY LSGHPLQEFK
DTLRRLTTVN AVEIPELNPG QQVILGGLVV GLKTITTRKG EPMCFLNLED LTSRAEIVIF
PRVYARFRHL LRPDAVILVN GTVNNNGEGN KIVGDYITDL EPGGPDLLEN HPFGG
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