Gene Daud_1047 details

Gene Information

• Locus tag: Daud_1047
• ID: 6027221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 1101148
• End bp: 1103139
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641593859
• Product: glycoside hydrolase 15-related
• Protein accession: YP_001717191
• Protein GI: 169831209
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3387] Glucoamylase and related glycosyl hydrolases
• TIGRFAM ID: [TIGR01577] oligosaccharide amylase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.425062
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGCGCG ACATTGTTCT GGGCAACGGC TCGATGTTGG TCAACCTTGA CCGGAACCTG 
AGTCTCAGGG ATTTATACTA CCCGTTTGTG GGCATGGAAA ACCATATTGC GGGCGGTAGA 
TGTTTGCTGG GCGTCTGGGT TGACGGGCAG TTCAGCTGGG TTCAGAACCC GCAGTGGCAG 
AAAGAGGCCG GGTATGTGCC CGGCACCCTG ATATCACTGG TGCGGGCTGT ACACAGCGGT 
CTCGGCCTGG AGGTGACTGT GGAAGACGCG GTGCACTACC GGCAAAACCT CTTTCTGCGC 
CGTATTCACG TCCGGAACCG GTGGCGGGAC CGCCGCGAAC TGCGGCTTTT CTTTGTAAAC 
GATTTCCACG TCGGGGGCTG GGATATCGGA GACACCGCCC TGTATGACCC CATTTCCCGG 
GCGGTGTGCC ATTACAAGCG GGACTACTAT TTCTACGTGA GCGGCAACTG TCAGGGACAG 
CCCATCTACC AGTACCATGT CCAGAAACGG TTCGGCGGCC GCGAAGGCAG TGCGCGAGAC 
GCCGAAGACG GCGTGTTGAG CGGCAACCCC ATTGACCAGG GCTCGGTGGA CAGCACCATC 
AGTTTCCGGG CGGCGCTGGA ACCGGAGGGC GAAGTCCAAG CGGACCTTTG GATCGCGGCA 
GGCCGGAGCC TGGACGAGGT ACGCAACCTG CACGCCTGGG TGGCGGACAA CGAGGCGGAC 
CGGTTGATGA ACGAGACCGC CAGCTTCTGG CGGCACTGGT TGGCGCTCGC GGAGCGCGAC 
TGGGCTGATT TGCCGGCGGA AGTGGTGGCG CTTTTCAAGA CCAGCCTGCT GGTGACGCGC 
ACCCAGATCG ACAACAACGG AGCTGTTCTG GCCGCGAACG ATACCGACAT CCTGAGCACC 
AACCGGGATC ACTATTCGTA CGTGTGGCCG CGTGATGGCG CCCTGGTGGC GCGTATGCTG 
GACGGCGCCG GCTACCACGA AATTACGGCG GCCTTCTATC GTTTTTGCGC CCGGACCATC 
AGTCGCGAAG GCTACTTCTA CCACAAATAC AACCCGGACG GAACGGTGGG CTCAAGCTGG 
CATCCCTGGA CGGCCGAGGT GGAGGAAGGG CTGCCGATCC AAGAGGACGG AACCGGACTG 
GTGCTCTGGG GACTCTGGAA ACATTTTGAG TATACCGGAA ACGTGGAGTT CCTGGCCTCG 
CTGTACCTGT CCGTGGTCAA GCCCGCGGCC GACTTCATGG TCCGTTACCG CGAACCGCGC 
ACCGGCCTGC CGCACCAGAG TTTTGACCTC TGGGAGGAAC GCAAGGGCGT GTTCACCTTC 
ACCGCCGCAG CCGTTTGGGC CGGGCTGACT GCCGCCGCCC GCTGCGCGCG GCTTCTGGGC 
GACGGTGCGG CTCAGGAGAA ATGGGAGGAA GCGGCGGGAA AGGTGCACGC CGGCATCCTG 
CGGGAACTCT TCGATCCGGA ACTGAACCGG TTCATCCGGG GGCGCTTCAA AGGGGGTGAC 
GGGTCCTGGG TCGAGGACCA CGCTCTGGAC GCCAGCCTTT ACTGGATCTC CGGGCTGGGA 
GTCCTGCCCC CCGACGATCC CCGGGTGAAA GCGACCATGC AGGCCGTGGC GGAGGGATTG 
TGGGTGAAGA CCGACATCGG AGGCGTGGCG CGGTACGCCA ACGACTACTA TTTCAAACGG 
AGCGACGATA TCGAAAAAGT ACCAGGCAAT CCCTGGTTCA TCTGTACCCT ATGGTTGGCG 
AACTGGTACG TCGATTCGGC AGAGACACCG GCGGAACTGG CGAAGGCCCG CGAACTCCTG 
AAATGGGCCC ACCGTTACCG GCTGGACACA GGCATACTGC CGGAGCAAGT GCACCCCTAC 
ACGGGCGAGC CGCTTTCGGT GGCGCCCCTG ACCTGGTCCC ACGCCACCTT TTGCCAGGTG 
GTGTTAAGCT ACCTGGCCAA ATGGCACGCC TTCCGGGACT TGCCACTGAA ACCGGAGAGC 
GGTTATGATT AG 

 

Protein sequence

MPRDIVLGNG SMLVNLDRNL SLRDLYYPFV GMENHIAGGR CLLGVWVDGQ FSWVQNPQWQ 
KEAGYVPGTL ISLVRAVHSG LGLEVTVEDA VHYRQNLFLR RIHVRNRWRD RRELRLFFVN 
DFHVGGWDIG DTALYDPISR AVCHYKRDYY FYVSGNCQGQ PIYQYHVQKR FGGREGSARD 
AEDGVLSGNP IDQGSVDSTI SFRAALEPEG EVQADLWIAA GRSLDEVRNL HAWVADNEAD 
RLMNETASFW RHWLALAERD WADLPAEVVA LFKTSLLVTR TQIDNNGAVL AANDTDILST 
NRDHYSYVWP RDGALVARML DGAGYHEITA AFYRFCARTI SREGYFYHKY NPDGTVGSSW 
HPWTAEVEEG LPIQEDGTGL VLWGLWKHFE YTGNVEFLAS LYLSVVKPAA DFMVRYREPR 
TGLPHQSFDL WEERKGVFTF TAAAVWAGLT AAARCARLLG DGAAQEKWEE AAGKVHAGIL 
RELFDPELNR FIRGRFKGGD GSWVEDHALD ASLYWISGLG VLPPDDPRVK ATMQAVAEGL 
WVKTDIGGVA RYANDYYFKR SDDIEKVPGN PWFICTLWLA NWYVDSAETP AELAKARELL 
KWAHRYRLDT GILPEQVHPY TGEPLSVAPL TWSHATFCQV VLSYLAKWHA FRDLPLKPES 
GYD