Gene Daud_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1025 
Symbol 
ID6027573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1073663 
End bp1074550 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID641593837 
Productpolyprenyl synthetase 
Protein accessionYP_001717169 
Protein GI169831187 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGC AGGCACTGGC TGCAAAGGCG GAAACAATCG ACGCGGCGCT GGACCGATAC 
CTGCGGCAGG CTTCGGAGAA TCCCCCGGTT ATTCACGAAG CGATGCGGTA CAGTGTGTTT
GCCGGCGGCA AGCGGCTCCG TCCGGCCCTG ACCCTCGCCG CCGCGCAAGC CGTGGGAGCC
CCGGAAAGAC TGGTGCTGCC GGCGGCCTGT GCGATTGAGC TGATCCACAC GTACTCCCTG
ATTCACGATG ACCTGCCCGC CATGGACAAC GATGACTTGA GGCGGGGCAA ACCGACCAAC
CACCGGGTGT TCGGCGAGGC GGTGGCGCTG TTGGCCGGAA GCGCCCTTTT CGCCCTGGCG
TTTGAGGTCC TCGCCGGGTG CCGCCGGGAC GGAGGGCTTG CGGCCGAACG AATCCTGGCG
GTCGTAGAGG AGGTCGCCGC GGCCTGTGGC ACAGCGGGTT TGATCGGGGG CCAAGCGCTC
GACGTGGTAT CCGTCTCCCG AACCGTCAGT GAGGCGGAAC TGGAAGCCGT ACATCGGGCC
AAAACCGGAG CGCTCTTCCG GGCGGCGGTG CGGGCCGGAG CGGTCTTGGG GGGCGCCAGT
CCGGTCCAGC TGGAGCGGCT GACCGTATTT GCCGAACATT TCGGGCTGGC CTTCCAGATC
ACTGACGACA TTCTGGACGT CACCGGATAC GCTGAGCAGA CCGGCAAGGC GGTGGGCAGC
GATGCCCGGA ACAGAAAACA CACTTACGTT TCGGTGTGCG GCCTAGAAGC GGCTCGGCGG
CGCGGTGCCG AAAGTTCTGC GGCCGCCCTG GCAGCCCTTG AAGAGTTTGG GCCTGAGGCG
GATTTCCTGC GCCAGGCGGC GGAATTCATC GTGTCACGAG AATTTTAA
 
Protein sequence
MFLQALAAKA ETIDAALDRY LRQASENPPV IHEAMRYSVF AGGKRLRPAL TLAAAQAVGA 
PERLVLPAAC AIELIHTYSL IHDDLPAMDN DDLRRGKPTN HRVFGEAVAL LAGSALFALA
FEVLAGCRRD GGLAAERILA VVEEVAAACG TAGLIGGQAL DVVSVSRTVS EAELEAVHRA
KTGALFRAAV RAGAVLGGAS PVQLERLTVF AEHFGLAFQI TDDILDVTGY AEQTGKAVGS
DARNRKHTYV SVCGLEAARR RGAESSAAAL AALEEFGPEA DFLRQAAEFI VSREF