Gene Daud_1015 details

Gene Information

• Locus tag: Daud_1015
• ID: 6026750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 1065671
• End bp: 1067515
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641593827
• Product: pyruvate carboxylase subunit B
• Protein accession: YP_001717159
• Protein GI: 169831177
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein; [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.091976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTGTGC TACGGATTAC CGACACTACT TTGCGGGACG GCCATCAGAG CCTATGGGCC 
ACGCGGATGC GTACCGCCGA CATGCTGCCG ATCCTTGAGA AACTGGACGC GGTGGGTTAC 
CACTCGCTGG AGGTTTGGGG CGGGGCTACC TTTGACGTGT GCTTGCGCTA TCTGAACGAA 
GACCCCTGGG AACGTTTACG CCTGATCAAA AAGCACGTCC GGAACACACC CCTGCAGATG 
CTCTTGCGCG GTCAATCCCT GGTGGGGTAC ACCCACTACC CGGACGATAT CGTCGAAGCG 
TTTGTGCACC GGATGGTGGC CAACGGGATC GACATCATAC GGGTATTCGA CGCCTTGAAC 
GATGTCCGGA ACATGGTGAC CTCCATCCGG GCCGCCAGGC AAGCCGGGGC ACACGTACAG 
GCGGCGGTGG TGTATACGGT CAGCCCCGTG CACACCACCG AACATTTTCT CCGGACCGCC 
TTGGACCTGG CCGAACTGGG GGCCGATTCC ATCTGCATCA AGGACATGGC TGGGCTGTTG 
GCCCCCTATA AAGCCTACGA ATTGGTGAGC CTGTTCAAAA AAGAGCTGCA GCTACCGGTA 
CAGCTGCACT GCCACTACAT CGGCGGTATG GCCGTGGGCG CCTACCTGAA GGCGGCCGAG 
GCGGGGGTTG ACGTTGTCGA CACCGCTTCT GTGCCGCTGG CCTTCGGTGC CTCTCAACCT 
CCGGTGGAAA CCGTGGTGCG GGCCCTGCGG GGAACACCCT ACGATACCAA ACTGCGGATC 
CGGGTCCTGT TCGAGATCGC CGAGTACTTT GAGGAAGTGA GGCGCCGGGA AGGGTATGAT 
CGGGGTGTAA CCCGTATTCA CGACATGCGC GTCTTTGACC ATCAGGTTCC CGGAGGCATG 
ATTTCCAACC TGGTTTCCCA GCTTGAGGAA CAGAAATCCC TGCACCGGCT GGAGGAGGTG 
CTGGCCGAGA TACCGCGAGT ACGGGCGGAA CTCGGCTACC CGCCGCTCGT GACCCCGACC 
AGCCAGATCG TCGGTACCCA GGCTGTCTTA AACGTACTGA CCGGTCAGCG TTACAAGCTG 
GTGCCCGGCG AGGTCAAGAA CTACGTCCAG GGTCTTTACG GAAAGCCGCC GGGCGAGCTG 
AATCCGGAAG TCATGCGTGA CATCCTCGGT GACAATGAGC CCATTACCTG TCGGCCGGCC 
GACTTGTTGG AACCGAGACT GGAAAAAATG AGAAAGGAAA TCGGTGCCCT CGCTACCAGC 
GAGGAGGACG TCCTATCGTA CGCCCTGTTC CCGCAAGTGG CCAAAAAGTT TTTCGAGGCC 
CGCCTGGCGC CGGAAAAGAA GGAAAATCGA CCCGCCCCGG TTAATAAGCC AGGTGCAGTG 
AAGGGCAAGG AGGCAAGAAG CATGAACTTG GAGGAAATTA GGGAACTCGT CAAGCTGCTG 
GATCGAACCG ACATCAAGGA GTTCTGCCTG GAAAGCCAAG GGATCAAGAT TGTGATCAAG 
AAGGGCGGAA CCGGGGAGGA GAACCGTCCT CCAGAACAGG CCACCCCGCT GGAGGGAGGC 
GCCAAACCCG CGGTCCAGGC ACCGCCGCAC GAGCCGGCGG CGAACACGGT GACCGTTACA 
GCTCCTATGG TGGGCACGTT TTACAGTTCG CCGGCTCCCG ACGCGCCGCC CTACGTCGAG 
GTGGGTTCCA AGGTGCAGGA GGGCCAGGTG CTGTGCATCA TCGAAGCGAT GAAACTAATG 
AACGAAATTG AGGCGGAAGT AGCCGGAGAG ATTGTGGACA TATTGGTTGG GAATGGGCAG 
CCAGTGGAAT ACGGGCAGCC ACTGTTTGTG ATTGCCCCTA AATAA 

 

Protein sequence

MSVLRITDTT LRDGHQSLWA TRMRTADMLP ILEKLDAVGY HSLEVWGGAT FDVCLRYLNE 
DPWERLRLIK KHVRNTPLQM LLRGQSLVGY THYPDDIVEA FVHRMVANGI DIIRVFDALN 
DVRNMVTSIR AARQAGAHVQ AAVVYTVSPV HTTEHFLRTA LDLAELGADS ICIKDMAGLL 
APYKAYELVS LFKKELQLPV QLHCHYIGGM AVGAYLKAAE AGVDVVDTAS VPLAFGASQP 
PVETVVRALR GTPYDTKLRI RVLFEIAEYF EEVRRREGYD RGVTRIHDMR VFDHQVPGGM 
ISNLVSQLEE QKSLHRLEEV LAEIPRVRAE LGYPPLVTPT SQIVGTQAVL NVLTGQRYKL 
VPGEVKNYVQ GLYGKPPGEL NPEVMRDILG DNEPITCRPA DLLEPRLEKM RKEIGALATS 
EEDVLSYALF PQVAKKFFEA RLAPEKKENR PAPVNKPGAV KGKEARSMNL EEIRELVKLL 
DRTDIKEFCL ESQGIKIVIK KGGTGEENRP PEQATPLEGG AKPAVQAPPH EPAANTVTVT 
APMVGTFYSS PAPDAPPYVE VGSKVQEGQV LCIIEAMKLM NEIEAEVAGE IVDILVGNGQ 
PVEYGQPLFV IAPK