| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0949 |
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| Symbol | |
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| ID | 6026442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1007006 |
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| End bp | 1007935 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641593762 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001717094 |
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| Protein GI | 169831112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGC TTAACCGTTA CACAGTGGAG GAAGAAGACG AACAGACCCG CCTGGACGTG
TTCCTGGCCG GACAGAATCC GGAACTGAGC CGGGCCCGTA TCCAGAAGCT CATTTCCCTG
GAGTTGGTCA CGGTCAACGG GCGTCCGGCA CGGGCCAGCC ACCGGGTACG GGGCGGCGAC
TGCGTGGAAC TAAAGGTGCC GGACCCGGAG ACGCCCAGAA TCGAGCCGGA AGCCATCCCT
TTGGAGGTCT GCTTCGAGGA CCCGGACGTG CTGGTGGTGA ACAAGCCCCG GGGGCTGGTG
GTTCACCCGG CCGTCGGGCA CTACTCCGGG ACGCTGGTGA ACGCGCTTTT GCACCACTGC
CGGGACCTTT CCGGCATCAA CGGTATTCTG CGCCCGGGAA TAGTCCACCG CCTGGACCGG
GACACCTCCG GGCTGCTGAT GGTCGCCAAG AACGACGCCG CTCACCTGGC CCTGGCCGGC
CAGCTCAAAG ACCGCGCGGT GCTCCGGCGG TACACCGCCC TGGTCCACGG CCGGCCCCGG
CGCGAGACGG GCACGGTGGA CGCTCCGATC GGACGCCACC CCCGGGACCG CCAGCGCATG
GCGGTCACTC CCCGCAGCGG TCGCGCGGCT CGCACCCACT ATCGCGTGGT CCGGCGCTTT
GACAAGTTTT CCCTGCTGGA ACTTACCCTG GATACCGGGC GCACCCACCA GATCCGCGTG
CACATGGCCC ACGTGGGTCA CCCGCTGGTC GGGGACCTGA AATACGGGCA TGCCCGCCCG
GAGCTGGGAC TTGAAGGCCA GTTCCTGCAC GCCGGCACCC TCGGGTTCCG GCACCCGCGC
ACCGGGGAGG TCTTGGTCTT CGAAGCCCCG CTGCCCTCCG AACTGGCCGC GGTGCTGGAG
CGCCTTTCCC CGTTGGGGCA ACCCAATTAG
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| Protein sequence | MATLNRYTVE EEDEQTRLDV FLAGQNPELS RARIQKLISL ELVTVNGRPA RASHRVRGGD
CVELKVPDPE TPRIEPEAIP LEVCFEDPDV LVVNKPRGLV VHPAVGHYSG TLVNALLHHC
RDLSGINGIL RPGIVHRLDR DTSGLLMVAK NDAAHLALAG QLKDRAVLRR YTALVHGRPR
RETGTVDAPI GRHPRDRQRM AVTPRSGRAA RTHYRVVRRF DKFSLLELTL DTGRTHQIRV
HMAHVGHPLV GDLKYGHARP ELGLEGQFLH AGTLGFRHPR TGEVLVFEAP LPSELAAVLE
RLSPLGQPN
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