Gene Daud_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0945 
Symbol 
ID6027552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp1002617 
End bp1003627 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content61% 
IMG OID641593757 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001717090 
Protein GI169831108 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGGAT ACAGCGTTTG TGTGGTTGGG GCCACAGGTG CGGTGGGACA GGAGATCCTG 
AAAGTACTGG CGCTGCGGGA ATTTCCGCTG AACAAGCTGC GGTTGTGTGC CACAGCGCGC 
TCCGCAGGGA AAAAGGTTGC TTTCGGCGGT GAGGAGCTTA CCGTCGAGGA GACCCGGGAA 
TGGTCGTTCG AGGGTATGGA CATTGCGCTG TTCGCCGGGG GGGCGGCCAG CACCGAATAT 
GCCGAGGCGG CTCGGAAGGC GGGTGCCGTG GTCATCGACA ATTCGAGCGC TTTCAGGCTA 
AACCCCGACG TGCCCCTGGT GGTTCCGGAG GTCAATCCCG AAGATGTCCG GTGGCACAAG 
GGGATTATCG CCAATCCGAA CTGTTCGACC ATCATCATGG TCGTGCCCTT GAAACCGCTG 
CATGACGCCG CCGGCATCCG GCGGGTGGTG GTTTCCACCT ACCAGGCGGT ATCCGGCGCA 
GGATCAGCCG CTGTTCAGGA ACTGGTCGCC CAGACCCGGG CGGTGCTGGA TGGACAAACT 
TACCCGCCCC GGGTTTTCGC ATACCAGATC GCTTTTAACC TGATCCCGCA CATCGACGTT 
TTTCAGGACC TGGACTACAC CAAGGAAGAA TGGAAACTGG TCCGGGAGAC CCGGAAGATC 
CTACACGAGC CGGACATGCG GGTCACCGCG ACCACGGTCC GGGTGCCTGT ATTCCGCAGC 
CACTCGGAGT CGATCAACGT CGAGACCGAG CGTTTTGTAA GTGCTCAGGA GGTCAGGGAG 
TTGCTTTCCC GCGCCCCCGG GGTGGTGGTG GTGGACAACC CGGAGCAGAA GCTCTATCCG 
ATGCCTCTTG ATGTGACCGA AAAGGACGAG GTGTTTGTCG GCCGCATTCG GCAGGACCCC 
ACCCTGGAGA ACGGCATTAA CATGTTTGTG GCCGCCGACC AGTTGCGCAA GGGAGCAGCG 
ACGAACGCGG TCCAGATTGC CGAATTGCTG GTGGACTACG GCCTGCTGTA A
 
Protein sequence
MPGYSVCVVG ATGAVGQEIL KVLALREFPL NKLRLCATAR SAGKKVAFGG EELTVEETRE 
WSFEGMDIAL FAGGAASTEY AEAARKAGAV VIDNSSAFRL NPDVPLVVPE VNPEDVRWHK 
GIIANPNCST IIMVVPLKPL HDAAGIRRVV VSTYQAVSGA GSAAVQELVA QTRAVLDGQT 
YPPRVFAYQI AFNLIPHIDV FQDLDYTKEE WKLVRETRKI LHEPDMRVTA TTVRVPVFRS 
HSESINVETE RFVSAQEVRE LLSRAPGVVV VDNPEQKLYP MPLDVTEKDE VFVGRIRQDP 
TLENGINMFV AADQLRKGAA TNAVQIAELL VDYGLL