Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0929 |
Symbol | |
ID | 6026649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 990029 |
End bp | 990946 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641593741 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001717074 |
Protein GI | 169831092 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.590741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAG TCCTTAACGT CCTTAAACCT CCCGGGATGA CCTCCCACGA CGTGGTCGGT TTCCTGAGAC GCAGACTGGG GATCAGGAAG GTTGGCCATA CCGGCACGCT GGACCCGTTG GCCGCCGGGG TGCTGGTCGT CTGCGTGGGC CGGGCGACCA GGATCGCTCA GTATATTCCG GATGACAAGG TCTACCGCGC CGAACTGGTC CTGGGAATCA CCACCACGAC CGGCGACGCT CAGGGTGACG TTCAACGGGT CGAGCCCCTT CCGGACGGCC TGGACTTGGA ACGGCTGGAG GAGGTGCTCG CCGGGTTTGC CGGCCCGGGG TTGCAGGTGC CGCCGATGAC GTCGGCGCGC AAGGTGAAGG GGAAAAAGTT GTACGAGTTG GCGCGCCGGG GGGTGGAGGT GCCGCGTGAA GCCCGCCCGG TCATGATCCA CCGCCTCCGC CTGGTGCACA CCAGGTTCGA GCGCAGCGCG CACCCGCGAG CGCTCATCGA TGTGTCCTGC AGCAAGGGTA CGTATGTCCG CACCCTGTGT GCCGACATCG GAGCGCGGCT GGGCTGCGGG GCCTATATGT CTTTCCTGGT GCGGTCGGCG GTAGGGCCGT TTCCAATCAC GGCGGCACGG ACCCTAGAGG AGCTCGAGGG ATCGCTGGCC GGGGAGTTGA TCGCGGTGGA TACCGCCCTC GGCCATCTGC CGGCGGTGCT CGTTCATCCC GGAGCGTCAC GGGCCGTTCT GTCCGGGAGA GCCCTCTATC CTCCCGGAAT CGCCGCGGGC CCCAGCCCGA AAGAAGTAGA CGGGTATGTG CGCCTGCGGG ACGAAACGGG TCTTTTAGCC GTGGCGAAGC CGCTCGCTGT GAGAGAGTCC CCGGAGCCCG TGGCTTTTCA ACCGGTCTGG GTGCGGGGCG GAGCTTAG
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Protein sequence | MEGVLNVLKP PGMTSHDVVG FLRRRLGIRK VGHTGTLDPL AAGVLVVCVG RATRIAQYIP DDKVYRAELV LGITTTTGDA QGDVQRVEPL PDGLDLERLE EVLAGFAGPG LQVPPMTSAR KVKGKKLYEL ARRGVEVPRE ARPVMIHRLR LVHTRFERSA HPRALIDVSC SKGTYVRTLC ADIGARLGCG AYMSFLVRSA VGPFPITAAR TLEELEGSLA GELIAVDTAL GHLPAVLVHP GASRAVLSGR ALYPPGIAAG PSPKEVDGYV RLRDETGLLA VAKPLAVRES PEPVAFQPVW VRGGA
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