Gene Daud_0923 details

Gene Information

• Locus tag: Daud_0923
• Symbol: nusA
• ID: 6027426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 984211
• End bp: 985290
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641593735
• Product: transcription elongation factor NusA
• Protein accession: YP_001717068
• Protein GI: 169831086
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000194155
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGCG AGTTTCTGGC GGCTTTGCGC GACCTGGAGA AAGAGCGCAG CATCAGTGTG 
GAAGTCCTGC TTGAAGCCAT CGAGGCGGCG CTTTTGTCCG CCTACCGGCG CAATTTCGGG 
ACTTCACACA ACGCGCGGGT GCAGGTTGAC CGCCACACCG GAGACTGCAA GGTGTACGCC 
AGGCGGACCG TTGTCCAGGA AGTGGAGGAC CCCCAGGATC AGATTTCCCT TGAGGAGGCC 
AGAGCCATTA ACCCGGGCTA CCAACTGGAG GACACGGTAG AATCGGAAAT CACGCCGCGC 
AATTTTGGAC GTATCGCCGC CCAAACGGCA AAACAGGTGG TGGTGCAGCG GATTCGGGAA 
GCAGAGCGAA ACATGGTCTT CGAGGAATTT GCCAGCCGCG AGGGCGACAT CGTCACCGGT 
GTGGTGCAGC GCATCGAGCA GCGCAACGTG TACATCGAAC TGGGCAAAAC CGAAGCCGTG 
CTTCCCCCGG CGGAACAGAT ACCGAGAGAG AACTACCGGC CCGGTCAACG GCTGAAGACA 
TATATTGTCG AAGTGAAGAA GACCACCAAG GGGCCGTTGA TCCTGGTTTC CCGGACTCAT 
CCGGGTCTCC TGAAGCGGCT GTTTGAGATT GAGGTTCCCG AGTTGCACCA GGGGCTGGTG 
GAACTGAAAG CGGTGGCGCG GGAGGCTGGG ATCCGGTCCA AGATCGCCGT CTATTCGAAT 
GATGAGGGCA TTGATCCGGT CGGGGCTTGT GTCGGCCCGA AGGGCGCCCG GGTACAGGCG 
ATCGTTCAGG AGTTGAACGG CGAGAAAATC GATGTCGTGA AGTGGAGCCC CGACTCCTCG 
AAGTTTGTGT CCAGTTCCCT GAGCCCGGCC AAGGTGATTG CGGTGGAGGT GTGGGAGGAC 
GAAAAGATCG CCCGGGTGAT CGTACCCGAC TACCAACTGT CGCTGGCCAT TGGGAAGGAA 
GGTCAAAACG CCCGCCTGGC CGCCAAGCTG ACCGGTTGGA AAATCGACAT CAAGAGCGAA 
TCGCAGATGG CTGAAATTTA CCGGGAATAT CTTGAGCAGC AGGGCTACGA GCAGGTGTGA 

 

Protein sequence

MNSEFLAALR DLEKERSISV EVLLEAIEAA LLSAYRRNFG TSHNARVQVD RHTGDCKVYA 
RRTVVQEVED PQDQISLEEA RAINPGYQLE DTVESEITPR NFGRIAAQTA KQVVVQRIRE 
AERNMVFEEF ASREGDIVTG VVQRIEQRNV YIELGKTEAV LPPAEQIPRE NYRPGQRLKT 
YIVEVKKTTK GPLILVSRTH PGLLKRLFEI EVPELHQGLV ELKAVAREAG IRSKIAVYSN 
DEGIDPVGAC VGPKGARVQA IVQELNGEKI DVVKWSPDSS KFVSSSLSPA KVIAVEVWED 
EKIARVIVPD YQLSLAIGKE GQNARLAAKL TGWKIDIKSE SQMAEIYREY LEQQGYEQV