Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0851 |
Symbol | |
ID | 6026572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 898759 |
End bp | 902085 |
Gene Length | 3327 bp |
Protein Length | 1108 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641593659 |
Product | trehalose synthase |
Protein accession | YP_001716996 |
Protein GI | 169831014 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTCGACC AAAATCCGCT CTGGTATAAG GACGCCATCC TGTACGAGCT TCACGTGCGG GCCTTTTTTG ACCGCAACGG CGACGGCATC GGTGACTTCC GCGGTCTGGC CGAAAAGCTT GATTACCTCC AGGATCTGGG GGTGACCGCG ATCTGGCTGC TGCCTTTCTA CCCTTCCCCC CTGAAGGACG ACGGCTACGA TATCGCCGAC TACACGGCCG TCCATCCGTC CTACGGGACG CTTGCGGACT TCAAGTTTTT CGTCCGGGAA GCCCACCGCC GGGGGTTGCG CGTGGTCACC GAACTGGTGT GCAACCACAC CTCGGACCAG CACCCCTGGT TCCAGCGCGC CCGGCGGGCG AAGGCGGGCA GCGTGTGGCG GAATTTCTAC GTCTGGAGCG ACACCCCGGA GAAGTACCGG GAAGCGCGAA TCATCTTCAA GGATTTCGAG ACTTCAAACT GGACTTGGGA TCCGGCGGCC GGCGCCTATT ACTGGCACCG GTTCTACGCG CACCAGCCGG ACCTGAACTA TGACAACCCC ATGGTCCGGA AAGCCATTTT CAAGGTGCTC GACTTTTGGC TGCGGATCGG GGTGGACGGG CTGCGCCTGG ATGCGGTGCC CTACCTGTAC GAGCGGGACG GCACAAACTG CGAGAACCTG CCGGAAACCC ACGCCTTTTT GAAAGAGTTG CGCCGCCACG TTGACGAACG CTTCCAGAAC CGCATGCTCC TGGCCGAAGC CAACCAGTGG CCCGAGCACG CCGCTGCCTA CCTGGGAGAC GAGTGCCATA TGGCCTTCCA TTTTCCGCTG ATGCCGCGCC TATTCATGGC GCTGCGCATG GAGGACCGCT TTCCGGTCGT CGACATTCTG ACGCAAACGC CCCCGATCTC GGAAACCTCC CAGTGGGCGC TTTTCCTGCG TAACCACGAT GAGCTGACCC TGGAAATGGT CACCGACGAG GAGCGGGACT ACATGTACCG CGCGTACGCG CACGACCCCC GGATGAGGAT CAACCTCGGC ATCCGCCGGC GTCTGGCCCC GTTGCTTGGA AACCACCGCC GGCGCATCGA GCTGATGAAC GGCCTTCTCT TTTCCCTGCC GGGAACCCCG GTGATTTACT ACGGGGACGA AATCGGCATG GGCGACAACA TCTACCTGGG CGACCGCAAC GGTGTGCGCA CGCCGATGCA GTGGAGCGCC GACCGCAACG CGGGGTTTTC CAAGGCCGAC CGCCAGCGGC TGTACCTGCC CGTTATCGTC GATGCCGAGT ATCATTACGA AACGGTCAAC GTCGAGACAC TTCAGAACAA CCCTCATTCC CTGTTGTCGT GGATGAAACG GCTGATCTCG CTGCGGAAGC GCTACAAAGC TTTCGGGCGC GGCAGCCTGG AGTTCCTGCA TCCCGAAAAC CGCAAAGTGC TGGCCTATGT TCGCCGTTAC GAGGACGAGT CGATCCTGGT CATCGCCAAC CTCTCCCGTT TCGCGCAGTG TGTCGAGCTT GACCTGAACG CTTACCGCGG TATGATCCCA GTCGAAATGT TCGGCCGTAC AGAGTTTCCT CCGGTAGGGG ACCGGCCGTA CTTTTTCACC CTCGGCCCAC ACGCCTTTTT CTGGTTTTCC CTGGAACCCC AGCGTCTCCT TTGGGAACGG AGCCCGGGCG GCGCCCCCAG GGCGGGCATT CCGACCCTGG TGTTAAAAGG CTCCTGGGAA GCTGCCTTTT GGGGCGGCGA CCGGGACGCC CTGGCGGAGG TCCTGCCGTT CTATCTTGCC AACTGCCGCT GGTTCGGGGG CAAGGCCCGG AGGCTGAATT CCACCCGGGT TACGGAGGTC ATCCCCGTGC CGTACAACGG TTCGGTGGCT TACATCACCT TGGTTCAGGC CGACTATACC GAAGGGGACC CCGAGACCTA TATCCTCCCC CTCGCTCTGG CCACAGGAGA GTGGGGGCGG GTGTGGGAGG GGGGCCGCGA ACTGGTCCAG TCGGCCGTGG CCCGGCTGCA AACAAAGGAT AAGACAGGCA TCCTGTACGA CGCCCTGTGG GACCCCGCCT TCTGTGAGGT CTTGCTGGAT GCCGTCCCCC GCCGGCGCCG CTTCAAAGGG GAATCCGGCA CTATGATCGC CACGCCGACG CGACAATTCG CCCGGCTGCG CGGTCCGGTA CAGGCGCCGG TGGAACCGGT GCTCATACAG GCGGAACAAA GCAACAGTAC AGTGCTGTTC GGGGACCGGC TGATGTTGAA GCTCTTCCGG CGTGCCGGGG AAGGCATTAA CCCCGATCTC GAAATCAGCC GTTTCCTGGC CGAGCAATCC ACCTTTACCC AGGTCGCCCC CCTGGCCGGC AGTCTGGAGT ATTTTCGGGA AAAGGACCGG CCGGTGACTC TGGCCGTGCT GCAGGGTTTC GTGCCGAACA AGGGGGACGC CTGGCAGTAC ACGCTGGGCG CGCTGTCTCG TTTCTTTGGA AGGGTCCGGC GGGCGTCCGG TCTGAAAGTG CCGCCGCTCC CGTCCAAAAT CCTGTTCGCT CAGACCGGGG AGGACCTCTC CCCGGCGACC AAAATGATCG GTGGTTATAT GGACAAGGCC CGGCTGCTCG GCCGGCGCAC GGCAGAGCTT CACCTGGCCC TTGCCGCCCG TCCGGATAAC CCAGACTTCG CCCCCGAACC GTTCACCACA TTTTACCAGC GGTCCCTGTA CCAGTCCATG CGCAGCCTGA CCAGCCAGGT CTTCCTGACT CTACGCCGCA AGCTGGCGGA GTTGCCGGAA GCGGCGCGCG CGGAAGCCCA GGCCGTTCTA GACCTTGAGG GGGAAGTCTT AAACCGCTTC CAGACCCTGC TCACCCACAA GATCGACACC GTGCGCACCC GCTGTCACGG CGACTACCAC CTCGGCCAGT TGCTTTACAC CGGCGAGGAT TTCGTGATCA TCGACTTCGA CGGCGAACCG GCCCGTCCGG TACAGGAGTC GCCGGCCAAA CGCACGCCCT TGCGCGACGT AGCAGGCATG CTCCGCTCCT TCCACTACGC TGCCTACACC GCGCTGTACA ACCAGACGGG CACAGACGGG CCGCCCCGCG GGGAAGACCG GGCCGTCCTG GAGCCGTGGG CCCGTTTCTG GCACCTGAAG GTCTCCGCCG CCTTTCTGGA CTCCTATTTC CAGACTGCCG GCCGGGCCTC CTTCCTGCCG GAGACGCCCG AGCAGTTGTC CGTCCTGCTG GACGCCTGCC TGCTGGAAAA GGCCGTGTAC GAACTGGGGT ACGAATTGAA CAACCGCCCG GAATGGGTGC CGATTCCGCT GAAGGGAATC CTGGAGTTGC TCCAGGTCCG GGCGTGA
|
Protein sequence | MLDQNPLWYK DAILYELHVR AFFDRNGDGI GDFRGLAEKL DYLQDLGVTA IWLLPFYPSP LKDDGYDIAD YTAVHPSYGT LADFKFFVRE AHRRGLRVVT ELVCNHTSDQ HPWFQRARRA KAGSVWRNFY VWSDTPEKYR EARIIFKDFE TSNWTWDPAA GAYYWHRFYA HQPDLNYDNP MVRKAIFKVL DFWLRIGVDG LRLDAVPYLY ERDGTNCENL PETHAFLKEL RRHVDERFQN RMLLAEANQW PEHAAAYLGD ECHMAFHFPL MPRLFMALRM EDRFPVVDIL TQTPPISETS QWALFLRNHD ELTLEMVTDE ERDYMYRAYA HDPRMRINLG IRRRLAPLLG NHRRRIELMN GLLFSLPGTP VIYYGDEIGM GDNIYLGDRN GVRTPMQWSA DRNAGFSKAD RQRLYLPVIV DAEYHYETVN VETLQNNPHS LLSWMKRLIS LRKRYKAFGR GSLEFLHPEN RKVLAYVRRY EDESILVIAN LSRFAQCVEL DLNAYRGMIP VEMFGRTEFP PVGDRPYFFT LGPHAFFWFS LEPQRLLWER SPGGAPRAGI PTLVLKGSWE AAFWGGDRDA LAEVLPFYLA NCRWFGGKAR RLNSTRVTEV IPVPYNGSVA YITLVQADYT EGDPETYILP LALATGEWGR VWEGGRELVQ SAVARLQTKD KTGILYDALW DPAFCEVLLD AVPRRRRFKG ESGTMIATPT RQFARLRGPV QAPVEPVLIQ AEQSNSTVLF GDRLMLKLFR RAGEGINPDL EISRFLAEQS TFTQVAPLAG SLEYFREKDR PVTLAVLQGF VPNKGDAWQY TLGALSRFFG RVRRASGLKV PPLPSKILFA QTGEDLSPAT KMIGGYMDKA RLLGRRTAEL HLALAARPDN PDFAPEPFTT FYQRSLYQSM RSLTSQVFLT LRRKLAELPE AARAEAQAVL DLEGEVLNRF QTLLTHKIDT VRTRCHGDYH LGQLLYTGED FVIIDFDGEP ARPVQESPAK RTPLRDVAGM LRSFHYAAYT ALYNQTGTDG PPRGEDRAVL EPWARFWHLK VSAAFLDSYF QTAGRASFLP ETPEQLSVLL DACLLEKAVY ELGYELNNRP EWVPIPLKGI LELLQVRA
|
| |