Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0818 |
Symbol | |
ID | 6026128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 863295 |
End bp | 865361 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641593628 |
Product | RecD/TraA family helicase |
Protein accession | YP_001716965 |
Protein GI | 169830983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.662153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAA CCATCACCGA CACCGTAAAC CGGTTCATTT TCAAAACTGA AACCTTCGCC ATTTTCAAGC TTGATAACAT TGTTGCGCTG GGCGATGTCG CTGGCGTTCG CGAGGGCGAC CGCTTGACCG TTACTGGCTC CTGGCAGGAG CATCCTAAAT ACGGCAGGCA GCTCAGAGTC GAACACTGGG AGAAACCCGT CCCGTCCACC GAAGAAGCCG CTGCAGACTT TCTTTCTTCC GGCCTGATCA AGGGCGTGGG CCCGGTATTG GCAGAGCGAA TTGTGAGCGT TCTTGGTCCC AATGCCGTGA GTGCGATTTT GGAAGATCCG GACGTATTGA AGAAGGTCAA GGGCATCGGC AAAAAAGCCC CGGAAATTCG CCGTCAGCTT CAGGAGACCT ATCAAGTGCA GCAGGTCGTA GCAGAGCTGA TACGGCTTGG GCTCACTTTG AAAACGGCGA TGAAGGCTTA CATGAAATTC GGCCGCCCGG CCGCCGAGTA CGTTCGGAGA AACCCCTACT GCCTGACCGA ACTGGATCTG ATCGGGTTCC ACCGGGCGGA CGACATTGCC CGGCGGGCCG GCCTGGCTCC GGATTCTTCT TTTAGAGTCA AGGCCGGAAT ACTGTATGTT TTAAACGAAT CTCTCTGGGA CGAGGGTCAT GCCTACCTGC CCAGGGATGA GCTCATTTCC CGCTCCCTGA CCTTGTTGAA CCATGTCGAA AAAAGCGTGT CGCTGGACAT TGTGGAGAAA GAACTCTCCC GCCTTAAAGG GGTTCACGGA AGTGCGGAAG TCTCTCTGGC CTGGGCCAGG GAGTACGAAG AAGAGATCGC CCGGGACGTG AAAAGGTTGG CCCGGCAACG GTTCGATGTA CCGCCTTTGC CCCGGGATCT GATCAGGGGC ATTGAGCTGA CCCCTGACCA GAATGCAGCA GTTAAGACTG CGCTGGAGAG CGGCTTTTCT ATCTTGACCG GCGGTCCCGG CGTGGGCAAG ACTCAGACTG TAAGGGCGGT CATCAGGGCC TTCGAGTTGC AGAACCCTTG GGGGGGAGTA TTTCTTTGCG CTCCTACAGG GAGAGCAGCC AGAAGGCTTT CGGAGGTGAC CGGGCGCCAG GCGCACACCG TGCACAAGCT TCTGGGCCTC CGGAACGGCC ACGCAGACCG CAACCGCAAA AACCCGCTGG AATGCGATCT GTTGATTTTG GACGAAGCGA GCATGGCCTG CTTGGTTTTG ACCAAGCGCC TCCTCGAAGC CGTTCCCAAC AACGCCAGGA TCCTTTTCGT CGGAGACGCG GACCAGCTTC CGAGCGTTGG CCCGGGCAAC ATTTTGCGCG ATCTGCTGGA CAAAGTTCCG ACTGTCCGCC TGACCGAAAT CTTTCGCCAG GCTGCCGAGA GCCAGATCGT AACGAACGCT CACCGGATAA ATAGGGGCCA GATGCCGCTG ATTGACCGCT CGAAGACGGA CTTTATATTC CTGGAAAGAG AAGATCCGGA AGACATCGCA AAGTGCGTGG CGACTTGCGC TTCCGGGATG GGTTACGATC CTTTGGACGT GCAGGTTCTT TCGCCGATGC GAAAGGGCCC GGTGGGGACG GCTGAGCTCA ATAAGCTCAT CCAGGGGGGG ATGTCCGGCC CCAGGGTGAA ATACGGCCAG TACGTCTTCC ATGTGGGCGA CAAGGTGATC CACACGAAGA ACAACTATGA CAAAGGGGTT TTCAACGGCG ACATCGGGAT TATCAAGAAG ATCAAGATGC AGCACGATGT CCTGGTGCAG TACAGCAGCG GCCTGGTTTC CTATTCCGGG GATGACCTGA GAGAGCTTGA GCCGGCGTGG GCGGTCACGG TTCACAAGGC TCAGGGCTCT GAGTTTAAGG CTGTAATAAT TCCCGTCACC ACCTCTCACT ATGTCATGCT GCACCGCAAC CTGATCTATA CCGCCGTCAC CAGGGCCAGG GAAAAAGTGA TTCTGGTGGG CACGAAGAAG GCTTTGGCCA TTGCGGTGCG CAACAACAAG CCGATTCAGC GTTACACCGC GCTTTCGGGC CTCCTGAGAG ACGCGCCCCG CCGTTAA
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Protein sequence | MTETITDTVN RFIFKTETFA IFKLDNIVAL GDVAGVREGD RLTVTGSWQE HPKYGRQLRV EHWEKPVPST EEAAADFLSS GLIKGVGPVL AERIVSVLGP NAVSAILEDP DVLKKVKGIG KKAPEIRRQL QETYQVQQVV AELIRLGLTL KTAMKAYMKF GRPAAEYVRR NPYCLTELDL IGFHRADDIA RRAGLAPDSS FRVKAGILYV LNESLWDEGH AYLPRDELIS RSLTLLNHVE KSVSLDIVEK ELSRLKGVHG SAEVSLAWAR EYEEEIARDV KRLARQRFDV PPLPRDLIRG IELTPDQNAA VKTALESGFS ILTGGPGVGK TQTVRAVIRA FELQNPWGGV FLCAPTGRAA RRLSEVTGRQ AHTVHKLLGL RNGHADRNRK NPLECDLLIL DEASMACLVL TKRLLEAVPN NARILFVGDA DQLPSVGPGN ILRDLLDKVP TVRLTEIFRQ AAESQIVTNA HRINRGQMPL IDRSKTDFIF LEREDPEDIA KCVATCASGM GYDPLDVQVL SPMRKGPVGT AELNKLIQGG MSGPRVKYGQ YVFHVGDKVI HTKNNYDKGV FNGDIGIIKK IKMQHDVLVQ YSSGLVSYSG DDLRELEPAW AVTVHKAQGS EFKAVIIPVT TSHYVMLHRN LIYTAVTRAR EKVILVGTKK ALAIAVRNNK PIQRYTALSG LLRDAPRR
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