Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0794 |
Symbol | |
ID | 6025904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 827685 |
End bp | 828668 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641593608 |
Product | nuclease |
Protein accession | YP_001716945 |
Protein GI | 169830963 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAA AATTTCTTTA CAAACAACAT TACGACCTGA CCACGGCCCG GGCCGTTCAA AGGGCCATTG CGGCCGGGGC GGCGCCGGTG GATTCAAGGA CTCTGGCCGA TCTGAGCGGG CGGAGACATT CCGGCCAGAC AGTCAGGGCG CACCTGGTAT CAATTTGTGC CCTGCTGCTT TTATTTGTCG CAGCGCTGGC CGGCTGCGGA GCCGAGACGT CCCCTCCCGC GGAAAAACCG GCGGCGCAGA GCGAAGAAGC GGCTGTTTCC CCGGCGGCGG AGAGCGCGCC TTCCGGCGAG CCCGCGCCCG CTGAGCCTGC AAAAGCTGCG CCCCAAAAAC CCGCGGCCCA GCCGGAAGAC CTTAATGAGA GCGCGGTTAA AACGCTGCCC GCCCGCGTGA CCGGGGTGGT CGACGGGGAC ACGGTCCACG TCCGCCTGGA AAGCGGAAAG GATGAGAAGG TCCGCTTCAT CGGCGTGGAC ACCCCGGAGA GCACCCGCGA GGTGGAGCCT TACGGGAAGG AGACCGCGGC CCACACGAAA AAGCGGCTGG AGGGCAAAAC CGTCTACCTG GAGCTGGACG CAAGCGAACG TGACAAATAT GGCCGCCTCC TGGCCTACGT CTGGCTTTCC CCGCCGGAAG ACGGCGGCGA GGCGGAAGTG CGGGCGAAGA TGTTCAACGC CAAGCTGCTG CTCGCCGGTT TCGCCCAGGT GATGACCGTG CCGCCGAACG TGAAGTACGC GGACCTCTTC GTACAGTTTC AGCGGGAGGC GCGGGAGAAC GGCCGGGGAC TGTGGGGAGC CGCTCCGCAG GAGCCGGAGG CGAAGGGCGC CTTCGTGGGC AGCGTCAGAA GCAACAAATA CCATTATCCC GACTGCCGCT GGGCGGGGCG GATAAGTCCT GCGAACGAGA TTTGGTTTAA TTCCGCCGCC GACGCCAGGG CGCAGGGGTA CGAACCCTGC GGCGTGTGCA GGCCTCCCGG TTAG
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Protein sequence | MPEKFLYKQH YDLTTARAVQ RAIAAGAAPV DSRTLADLSG RRHSGQTVRA HLVSICALLL LFVAALAGCG AETSPPAEKP AAQSEEAAVS PAAESAPSGE PAPAEPAKAA PQKPAAQPED LNESAVKTLP ARVTGVVDGD TVHVRLESGK DEKVRFIGVD TPESTREVEP YGKETAAHTK KRLEGKTVYL ELDASERDKY GRLLAYVWLS PPEDGGEAEV RAKMFNAKLL LAGFAQVMTV PPNVKYADLF VQFQREAREN GRGLWGAAPQ EPEAKGAFVG SVRSNKYHYP DCRWAGRISP ANEIWFNSAA DARAQGYEPC GVCRPPG
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