| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0758 |
|---|
| Symbol | |
|---|
| ID | 6027602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 788944 |
|---|
| End bp | 790131 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641593577 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001716914 |
|---|
| Protein GI | 169830932 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAGGG CGATTCTTTT AGCGGACGTG GACGCCTTCT ACGCCAGCGT CCACCAGGCG
CTGGACCCCG GCCTGAAAGG CAGGCCGGTC GTCGTGGCCG GCGACCCCGC AGCGCGCCGC
GGCGTCGTCC TGGCGGCCAG CTACGAGGCC AAGGGCAGGG GCGTGAAGAC GGGCATGCCG
GTGCGCGAGG CGCGGCGGCT GTGCCCTGAC GGGGTCTTCC TCAAACCGCA GCACCACCTC
TACCTGCACT TTTCCACCCG CATCCTGGGC ATCATGCGCG ACTTCACCCC GCTGGTAGAG
CCGTTCTCCA TCGACGAGGC CTTCCTCGAC GTCACCGGGT GCCGAAACCT CTTCGGCCCC
CCGGAAGAAA TCGCCCTGGC CCTCAAAAGG CGCATCCGCC GCGAGGTGGG CGTAACCTGC
AGTGTCGGGA TAGGACCGAA CAAGCTCCTG GCCAAGATGG CCGCGGGGCT CCGAAAGCCG
GACGGCCTCA CGGTCCTGCG GCACGAGGAC GTGCCCGCGC GGCTCTGGCC CCTGCCGGTG
AGGGAACTCT TCGGCGTCGG CCCCCGGTAC GAGGAGCACC TGCGAAGGCT TGGCATCCGC
ACCATCGGCG ACCTGGCCAG CTTCCCGGTG AGGGTTCTCA AGATGCGCTT CGGGGTTTAC
GGCGAGCTCC TCTGGCGGTG CGCCAACGGC GTGGACGAGA GCCCCGTCGA CCCCCGTTCG
CTCGACAGGT GCAAGAGCGC CGGCCACCAG ATAACCCTGC CCAGGGACTA CCGCCGTCAC
GGGGAGATAA GGGTGGTCAT CCTGGAGCTG GCCGACCAGG TGGCCGCGCG GGTCAGGGCC
GGCGGTTACG CGGGCAGGAC GGTGGTCCTC TCCCTGAAGG ACGCCGGCTT CAGGTACCTG
TCGCGCCTGA AGACCCTTCC GGCGCCCACC GACCTGGCGG CGGACATCTA CCGGGCGGCG
GCAAGTCTTC TGGAGCGGCA CTGGCCGGAA GGGTGGCCGG TGCGCATGGT GGGGGTGGCC
CTGGCCGGGC TCGTCGCCAG GCCGCCGGTG CAGGCGACCC TCTTCGGGGA GAGGGAGAGG
CTGGAGGCGG CCGAGCGGGC CTGCGACCAC ATCCGGGAGA GGTTCGGGGC GCGGGCGGTC
TTCCGGGCGT CCTCCCTCAC GGGGGCCGGG GTGTTGTATG CGCGGTAA
|
|---|
| Protein sequence | MERAILLADV DAFYASVHQA LDPGLKGRPV VVAGDPAARR GVVLAASYEA KGRGVKTGMP
VREARRLCPD GVFLKPQHHL YLHFSTRILG IMRDFTPLVE PFSIDEAFLD VTGCRNLFGP
PEEIALALKR RIRREVGVTC SVGIGPNKLL AKMAAGLRKP DGLTVLRHED VPARLWPLPV
RELFGVGPRY EEHLRRLGIR TIGDLASFPV RVLKMRFGVY GELLWRCANG VDESPVDPRS
LDRCKSAGHQ ITLPRDYRRH GEIRVVILEL ADQVAARVRA GGYAGRTVVL SLKDAGFRYL
SRLKTLPAPT DLAADIYRAA ASLLERHWPE GWPVRMVGVA LAGLVARPPV QATLFGERER
LEAAERACDH IRERFGARAV FRASSLTGAG VLYAR
|
|---|
| |