| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0645 |
|---|
| Symbol | rnc |
|---|
| ID | 6026916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 681212 |
|---|
| End bp | 681919 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641593474 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001716811 |
|---|
| Protein GI | 169830829 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0482466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCGT TCACGAACCT GGCGGAATTC CAGGAAGGCA TCGGGCTCTT CTGGCGGGAT
CCGGACCTTT TGCTTGAAGC GCTGACCCAC AGCTCATTCA GCTACGAACA CCCGGGGCAC
CGGCACAACC AGCGGCTGGA ATTCCTGGGT GACGCGGTAC TGGAAATCGT GGTCAGTGAG
CACCTGTACC GGCGGCTGCC CGATGCTCCC GAAGGCGACC TGACGAAAAT CCGCGCCGCC
GTGGTCTGCG AACCGGCCCT GGCGCACGTG GCCCGAGAGA TGAACCTGGG TACCTACTTG
CGAATGGGCC GGGGGGAAGA GCTGTCGGGC GGCAGGGAGC GCCCCTCGGT ACTGGCCGAC
GCCCTGGAGG CGCTGCTGGG GGCGCTTTAT CTCGACCAGG GTTTGGAGGT CGCCCGGTGG
TTTGCCCTGC AAAGCCTCGA ACCCATAATT AGTGCCACGC TTGCTGGGAA GGGGGAGGCC
GACTACAAGA CCCGGCTGCA GGAACTCCTG CAGAAAAGGT CTCCCGAGCC GTTGCGCTAT
GTAATCATCA AGGAAGAGGG TCCGGACCAC AACAAGTTGT TCACCGCCGG GGTGGTGTAC
CGGGGTAAGG TTCTAGGCCG GGGCACCGGG CGTACCAAGA AAGAGGCCGA ACAGCACGCG
GCCAGGGAGG CGCTAGTCAG TTTTGAGCGC GTTGAACAGC ACCACTAG
|
|---|
| Protein sequence | MVPFTNLAEF QEGIGLFWRD PDLLLEALTH SSFSYEHPGH RHNQRLEFLG DAVLEIVVSE
HLYRRLPDAP EGDLTKIRAA VVCEPALAHV AREMNLGTYL RMGRGEELSG GRERPSVLAD
ALEALLGALY LDQGLEVARW FALQSLEPII SATLAGKGEA DYKTRLQELL QKRSPEPLRY
VIIKEEGPDH NKLFTAGVVY RGKVLGRGTG RTKKEAEQHA AREALVSFER VEQHH
|
|---|
| |