Gene Daud_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0605 
Symbol 
ID6027588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp643352 
End bp644131 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID641593434 
Producttranscriptional repressor CodY 
Protein accessionYP_001716771 
Protein GI169830789 
COG category[K] Transcription 
COG ID[COG4465] Pleiotropic transcriptional repressor 
TIGRFAM ID[TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.44841e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTGC TGGAGAAATG CCGGGCGATC AACAGGATCC TGCAGAAGTC CGCCGGTTAC 
GCGGTAGACT ATGGTGAAGT GGCCCAGGTG CTCTGTGCTA ACCTTCGGGC CAACGCCTAC
ATTTTGGACG AGGAGGGCCG GATTCTGGGG GCCGAGTTCC TGGATGATTT CAGTTGCGGA
GTTGTTCGCA GCATGATTTA CGAATCGGGA TTCCCCCGGG AGTACAACGA GTGGTTGCTG
GGGATTCCCT CGACCTACGC CAATTTCTGT CAGACGGAAA ACGCCTGTGT ATTCAACGCC
TACGAACACT GCCAGTACGT GAACAAGGTG ACCACGGTGG TACCCATCGT GGGTGCCGGC
AAGCGCCTTG GGACCCTGGT GCTCGCCAAA TTCGGCGAGG AGTTTACGGG TGACGATTTG
GTGCTGGCCG AAATCGGGGC GACGGTGGTG GGCATGGAAA TCCTGCGGGC CCAGGTGGGC
CGCATGGAAG AGGACGTCCG GAAGCGGACC GCCGTACAGG TCGCCCTGGG TACGCTCTCC
TATTCGGAAC TGGATGCAGT GCGGCACATC TTCAGGCAAC TCGACGGCAG TGAAGGCCTC
CTGGTGGCCA GCAAGATCGC CGACCGGGCC GGTATCACCC GTTCGGTGAT CGTGAACGCC
CTACGCAAAT TTGAGAGCGC GGGCGTAATT GAGTCCAAGT CCCTGGGCAT GAAAGGCACC
TATATTCGGG TGCTCAATGA CCGTTTACTC GACGAACTGG CGAAAATGCA ACAGAAGTAG
 
Protein sequence
MTLLEKCRAI NRILQKSAGY AVDYGEVAQV LCANLRANAY ILDEEGRILG AEFLDDFSCG 
VVRSMIYESG FPREYNEWLL GIPSTYANFC QTENACVFNA YEHCQYVNKV TTVVPIVGAG
KRLGTLVLAK FGEEFTGDDL VLAEIGATVV GMEILRAQVG RMEEDVRKRT AVQVALGTLS
YSELDAVRHI FRQLDGSEGL LVASKIADRA GITRSVIVNA LRKFESAGVI ESKSLGMKGT
YIRVLNDRLL DELAKMQQK