| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0530 |
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| Symbol | |
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| ID | 6027595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 567958 |
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| End bp | 569697 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641593367 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001716704 |
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| Protein GI | 169830722 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.82222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGGCC GGTCCCAGTT CGAGACCGGC CCTTTTCCTT GTACACGCCA TTACAAATCT
CTACCGTTTT CGAACAAGGA TTATCCACTT ATTTGCAGAA CACTTCCTTT CACTATGAAC
GATCAGCCTG AAAGTGGAAA GCCCTTGGAA TCGGCAGTAT CAGCCGTCAA CAACACAAAC
CGGAGAGCTG ATGCGGCCTG GTTCGAGCTT GACCCGCAAA TCAAGTCCAT ACTCGACCTC
CTCTCGGAGG GACTGGTCTG CCTCGATCCG GATCTGAAAG TGCTCTGGGC CAACCGGAGT
ACCGCAGAGT CGGCCGGCCT GGCGCCGGAG GCGTTCGTCG GCCGTCACTG CTACGAAATC
CGGCACCGCC GCAGCGAAGA ATGCCCGGGT TGCCCAGTCC GCAAGGCACT CCAGAGCGGT
CAGCCGCAAG AGGGCGAACT CTGCACTCCG GACGGGCAGG ATTTGTTTAT CCGGGCCTAT
CCGCTCCTGG ATGAACAGGG TATCGTCCAG GGCGCCGTTG AACTTGCGGT GAACATTACG
GGATGGAAGC AGACGGAGAA AGAGCTGCGG GATCAACTGG ATCGGCTTGA GGTACTCCTG
CAAGCGCGCA ACGCCGAACT CAGCGCGGTC AATGAACAAC TACAAAGGGA AATCGCCGCG
CGGCGGCGGG CGGAAGAGGC GCTCCGCTCA TCCGAGCAGT GGTTCCACAA GGTTTTCCGC
TCGAGTCCGG ACATCATGTT CATTGTTGAC GACGAGGGCC GCTACTTCGA CGTAAACGAA
AACTGGTCGC ACCTTACCGG TCAGCGGCGC GAGGAAGCCA TCGGGTCCAG GGCCGTGCAA
CCGGTCCTGA TAATCAGTCC GGCGGCGCTG GCGCGCATAG CCGGAGAAAT CGCCGCAGAA
CGGACAGTGC ACAACCTGGA GATCAACTAC CGGTCGCAGA CCGGTGAGCA GCACGCAGGA
CTGATGTCCG TGGAATTGCT GGACCTGAGT GGTGACCGGT GTTGTCTGGT TTCCTTGAGA
GACATCACCG TCCGGAAACA TATAGAGCAT GAAATGGCCC GGCTTGACCG GTTGAATCTG
ATCGGGGAAA TGGCGGCCGG CATTGTCCAC GAGATCAGAA ACCCGTTGAC GGCCGTGCGC
GGATTCCTGC AGATGTTCCG GGAGCGAAAG GAATGGTCCG ACTATACCAA GCACCTTGAC
CTGATGACCG CCGAACTCGA CCGGGCCGGC GCCATCGTCA CCGGATTTTT GTCCCTGGCC
AAAAACAGGC CGTTGAATCA GAAACCCCAC AACCTCAATG CCATAATCTC GTCCCTGCTT
CCGCTCATCC AGGCCGATGC CTTGACGGGG GACAAGTACG TGCAGGCCAA CCTCAATGAG
GTGCCGGATT TGCTGCTGGA CGAGAACGAA ATCCGCCAGC TCATACTGAA CCTCGCCCGC
AACGGGCTCG AAGCAATGTC CGCTTCCGGG AGGCTGACGC TCAACACCTT CATGGACGGC
GGCGAGGTGG TCCTGGCGGT CCAGGACCAG GGTCCCGGCA TCGAACCGGG ACTCGTCGAC
AAGATCACCA GGCCCTTCGT CACCAACAAG GAACAGGGCA CCGGCCTGGG ACTGGCGGTC
TGTGACAGTA TCGCCGCCCA GCACAATGCC ACGATGACTT TTGAAACCAG CCCCGCCGGA
ACCACCTTCT ATGTACGTTT TCCGCTATCG GTAAACACCT CCCCAAAACA ACGCCCCTGA
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| Protein sequence | MPGRSQFETG PFPCTRHYKS LPFSNKDYPL ICRTLPFTMN DQPESGKPLE SAVSAVNNTN
RRADAAWFEL DPQIKSILDL LSEGLVCLDP DLKVLWANRS TAESAGLAPE AFVGRHCYEI
RHRRSEECPG CPVRKALQSG QPQEGELCTP DGQDLFIRAY PLLDEQGIVQ GAVELAVNIT
GWKQTEKELR DQLDRLEVLL QARNAELSAV NEQLQREIAA RRRAEEALRS SEQWFHKVFR
SSPDIMFIVD DEGRYFDVNE NWSHLTGQRR EEAIGSRAVQ PVLIISPAAL ARIAGEIAAE
RTVHNLEINY RSQTGEQHAG LMSVELLDLS GDRCCLVSLR DITVRKHIEH EMARLDRLNL
IGEMAAGIVH EIRNPLTAVR GFLQMFRERK EWSDYTKHLD LMTAELDRAG AIVTGFLSLA
KNRPLNQKPH NLNAIISSLL PLIQADALTG DKYVQANLNE VPDLLLDENE IRQLILNLAR
NGLEAMSASG RLTLNTFMDG GEVVLAVQDQ GPGIEPGLVD KITRPFVTNK EQGTGLGLAV
CDSIAAQHNA TMTFETSPAG TTFYVRFPLS VNTSPKQRP
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