Gene Daud_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0505 
Symbol 
ID6027194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp544801 
End bp546792 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content52% 
IMG OID641593346 
ProductATP-dependent endonuclease, OLD family protein 
Protein accessionYP_001716683 
Protein GI169830701 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0949649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATTA GCGCGGTACA CGTGAAGAAC TTCCGGTCAA TCCTGGATGA TTCGCTTCCC 
TGCGACCGCT TGACGGCATT GGTAGGCCGT AATGGAGCGG GGAAGTCTTC ATTACTCAGG
GCATTAGAAT TGTTCTATGA CCCGTCTGCC AAGGTGACAA CCGAGGATTT CTATGCGGAG
GATACCAGTC AGGATATTGA GATTGCCGTT ACCTTCGCCG AATTATCTAC CGAGGAGCAA
GATTTCTTTT CCGCATATAT CGACAACGGT ACCCTTACTG TGGTACGTGT CTTCTCGCTG
GCACCTGGTA GGAAATCCGG CACCTACCAT GGCATGAGGC TACAGAACCC AGACTTCGCA
GAGGTTCGCA CTGCAGGTGG TAGGAGAGAG ATCACGAACA AGTACAATGA GTTGAGAAGT
ACCGAAAAGT ACTCGTCACT TCCAACTGTA CGGTCTGCTG ACGAGGCCTT AAGCAAGCTC
CAGGAATGGG AATCCGCTAA CCCTAACGCA TGCGTCAGGA TGCGCGACGA TGGCCAGTTC
TTTGGGTTTA CAGAGGTCGG GCAAGGTTAC CTAGGTCGTC ATACCCGCTT CATTCGAATT
CCGGCTGTTC GTGATGCCTC AGAAGACGCC ATGGAGAGAA GAGGCTCCTG CGTCACCGAG
ATCATGGACC TCGTTGTACG TAGCGCGCTT GCGCGCAGGA AGGACATAGC AACATTCAAG
GAAGAAACGC AGGCGAAGTA TAGAGATATT CTAGACCCGG CCAAACTCAG CGAACTAACA
GGGCTTCAGG CACAGCTGTC CAAGACGCTG AAGCAGTATG CCCCGGAGGC TGACGTTTCC
CTGCGCTGGG CTGAATTTGC TGATATTAAC ATCCCGATGC CTGAAGCCCA AGTCAAGCTG
GTTGAAGATG GGTACGAGTC ATCGGTGTTA CGTACGGGTC ACGGTCTCCA ACGTGCCTTC
ATCTTGACCA TGTTGCAACA TCTGGTTGCG GCGCGAGAAA TGAAGAAGAC AATGGAGGAG
GGTTTCGATT CGAAGGAGCA AAGTTCAGAG GCAGAAGAAC CATACCTTCC GGGTCTCGTC
CTGGCCATCG AAGAACCGGA GTTATACCAA CATCCCAGCC GCCAGCGGCA TCTGGCCTCC
GTCCTTGTAA AACTGGCAAC AGGAACAATT CCAGGAGTCG CCAAGAAAAC ACAGGTCATC
TATTCGACTC ACTCCCCCTT ATTTGTTGGT CTTGACCGCT TTGATCAAAT CAGGCTCCTT
CGAAAAAAAG ATGTTGGGGC CGGAAAGCCG AAGGTCACAG AAGTTGTAAA GGCCAATCTT
GAAGCTGTGG CCGAAGAGCT GTGGGATGCC TGTGGCCGAC AAGGAGTCAA GTATACGTCA
GAAACGCTTC GACCCCGACT ACAGGCGATT ATGACTCCTT GGGTCAATGA GGGATTTTTC
GCGGATGTAG TGGTGCTGGT TGAAGGTGAA GATGATCGAG CTGCCATCCT TGGTGTGGCC
AGGGCGATGG GGTATGATTT CGATAGCGCG AACATCTCGG TTATTCCGTG CATGGGCAAG
CCCAATTTAG ATCGACCGCT GGTCATTTTT CGGCGCTTAC GGATCCCTGT TTACGTGATT
TGGGACAGCG ATTACGGAGA AAGGGACCCG AAACCGGAAA GCAACCGCTA CTTGTTGCGG
CTTCTCGGCC AGGCGGAGGA AGATTGGCCG AATATAGTTG AAGACTGGTA CGCCTGTTTC
GAGGTGAAGC TGGAAGCGAC TATTGCGGAG GAGATTGGGC AGGAGCTATT TAATCAATTG
CTGTCTCAAG CCCAAAACGA GCTTGGAATC CCAAAGAAAG AGCACGCACT AAAAAACCCC
GTTGTTCTTC AACAGATTGT TGAAAAAGCC GCCGCTGAAG GGAAAGAGAG CATATCTTTA
AAGGGTATCG TTCAAAAAAT CATTGCCCTG AAGTCCCGAC AGGAGGAGAG TAATGATCCC
CAAAGAGTGT AA
 
Protein sequence
MLISAVHVKN FRSILDDSLP CDRLTALVGR NGAGKSSLLR ALELFYDPSA KVTTEDFYAE 
DTSQDIEIAV TFAELSTEEQ DFFSAYIDNG TLTVVRVFSL APGRKSGTYH GMRLQNPDFA
EVRTAGGRRE ITNKYNELRS TEKYSSLPTV RSADEALSKL QEWESANPNA CVRMRDDGQF
FGFTEVGQGY LGRHTRFIRI PAVRDASEDA MERRGSCVTE IMDLVVRSAL ARRKDIATFK
EETQAKYRDI LDPAKLSELT GLQAQLSKTL KQYAPEADVS LRWAEFADIN IPMPEAQVKL
VEDGYESSVL RTGHGLQRAF ILTMLQHLVA AREMKKTMEE GFDSKEQSSE AEEPYLPGLV
LAIEEPELYQ HPSRQRHLAS VLVKLATGTI PGVAKKTQVI YSTHSPLFVG LDRFDQIRLL
RKKDVGAGKP KVTEVVKANL EAVAEELWDA CGRQGVKYTS ETLRPRLQAI MTPWVNEGFF
ADVVVLVEGE DDRAAILGVA RAMGYDFDSA NISVIPCMGK PNLDRPLVIF RRLRIPVYVI
WDSDYGERDP KPESNRYLLR LLGQAEEDWP NIVEDWYACF EVKLEATIAE EIGQELFNQL
LSQAQNELGI PKKEHALKNP VVLQQIVEKA AAEGKESISL KGIVQKIIAL KSRQEESNDP
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