Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0505 |
Symbol | |
ID | 6027194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 544801 |
End bp | 546792 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641593346 |
Product | ATP-dependent endonuclease, OLD family protein |
Protein accession | YP_001716683 |
Protein GI | 169830701 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0949649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATTA GCGCGGTACA CGTGAAGAAC TTCCGGTCAA TCCTGGATGA TTCGCTTCCC TGCGACCGCT TGACGGCATT GGTAGGCCGT AATGGAGCGG GGAAGTCTTC ATTACTCAGG GCATTAGAAT TGTTCTATGA CCCGTCTGCC AAGGTGACAA CCGAGGATTT CTATGCGGAG GATACCAGTC AGGATATTGA GATTGCCGTT ACCTTCGCCG AATTATCTAC CGAGGAGCAA GATTTCTTTT CCGCATATAT CGACAACGGT ACCCTTACTG TGGTACGTGT CTTCTCGCTG GCACCTGGTA GGAAATCCGG CACCTACCAT GGCATGAGGC TACAGAACCC AGACTTCGCA GAGGTTCGCA CTGCAGGTGG TAGGAGAGAG ATCACGAACA AGTACAATGA GTTGAGAAGT ACCGAAAAGT ACTCGTCACT TCCAACTGTA CGGTCTGCTG ACGAGGCCTT AAGCAAGCTC CAGGAATGGG AATCCGCTAA CCCTAACGCA TGCGTCAGGA TGCGCGACGA TGGCCAGTTC TTTGGGTTTA CAGAGGTCGG GCAAGGTTAC CTAGGTCGTC ATACCCGCTT CATTCGAATT CCGGCTGTTC GTGATGCCTC AGAAGACGCC ATGGAGAGAA GAGGCTCCTG CGTCACCGAG ATCATGGACC TCGTTGTACG TAGCGCGCTT GCGCGCAGGA AGGACATAGC AACATTCAAG GAAGAAACGC AGGCGAAGTA TAGAGATATT CTAGACCCGG CCAAACTCAG CGAACTAACA GGGCTTCAGG CACAGCTGTC CAAGACGCTG AAGCAGTATG CCCCGGAGGC TGACGTTTCC CTGCGCTGGG CTGAATTTGC TGATATTAAC ATCCCGATGC CTGAAGCCCA AGTCAAGCTG GTTGAAGATG GGTACGAGTC ATCGGTGTTA CGTACGGGTC ACGGTCTCCA ACGTGCCTTC ATCTTGACCA TGTTGCAACA TCTGGTTGCG GCGCGAGAAA TGAAGAAGAC AATGGAGGAG GGTTTCGATT CGAAGGAGCA AAGTTCAGAG GCAGAAGAAC CATACCTTCC GGGTCTCGTC CTGGCCATCG AAGAACCGGA GTTATACCAA CATCCCAGCC GCCAGCGGCA TCTGGCCTCC GTCCTTGTAA AACTGGCAAC AGGAACAATT CCAGGAGTCG CCAAGAAAAC ACAGGTCATC TATTCGACTC ACTCCCCCTT ATTTGTTGGT CTTGACCGCT TTGATCAAAT CAGGCTCCTT CGAAAAAAAG ATGTTGGGGC CGGAAAGCCG AAGGTCACAG AAGTTGTAAA GGCCAATCTT GAAGCTGTGG CCGAAGAGCT GTGGGATGCC TGTGGCCGAC AAGGAGTCAA GTATACGTCA GAAACGCTTC GACCCCGACT ACAGGCGATT ATGACTCCTT GGGTCAATGA GGGATTTTTC GCGGATGTAG TGGTGCTGGT TGAAGGTGAA GATGATCGAG CTGCCATCCT TGGTGTGGCC AGGGCGATGG GGTATGATTT CGATAGCGCG AACATCTCGG TTATTCCGTG CATGGGCAAG CCCAATTTAG ATCGACCGCT GGTCATTTTT CGGCGCTTAC GGATCCCTGT TTACGTGATT TGGGACAGCG ATTACGGAGA AAGGGACCCG AAACCGGAAA GCAACCGCTA CTTGTTGCGG CTTCTCGGCC AGGCGGAGGA AGATTGGCCG AATATAGTTG AAGACTGGTA CGCCTGTTTC GAGGTGAAGC TGGAAGCGAC TATTGCGGAG GAGATTGGGC AGGAGCTATT TAATCAATTG CTGTCTCAAG CCCAAAACGA GCTTGGAATC CCAAAGAAAG AGCACGCACT AAAAAACCCC GTTGTTCTTC AACAGATTGT TGAAAAAGCC GCCGCTGAAG GGAAAGAGAG CATATCTTTA AAGGGTATCG TTCAAAAAAT CATTGCCCTG AAGTCCCGAC AGGAGGAGAG TAATGATCCC CAAAGAGTGT AA
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Protein sequence | MLISAVHVKN FRSILDDSLP CDRLTALVGR NGAGKSSLLR ALELFYDPSA KVTTEDFYAE DTSQDIEIAV TFAELSTEEQ DFFSAYIDNG TLTVVRVFSL APGRKSGTYH GMRLQNPDFA EVRTAGGRRE ITNKYNELRS TEKYSSLPTV RSADEALSKL QEWESANPNA CVRMRDDGQF FGFTEVGQGY LGRHTRFIRI PAVRDASEDA MERRGSCVTE IMDLVVRSAL ARRKDIATFK EETQAKYRDI LDPAKLSELT GLQAQLSKTL KQYAPEADVS LRWAEFADIN IPMPEAQVKL VEDGYESSVL RTGHGLQRAF ILTMLQHLVA AREMKKTMEE GFDSKEQSSE AEEPYLPGLV LAIEEPELYQ HPSRQRHLAS VLVKLATGTI PGVAKKTQVI YSTHSPLFVG LDRFDQIRLL RKKDVGAGKP KVTEVVKANL EAVAEELWDA CGRQGVKYTS ETLRPRLQAI MTPWVNEGFF ADVVVLVEGE DDRAAILGVA RAMGYDFDSA NISVIPCMGK PNLDRPLVIF RRLRIPVYVI WDSDYGERDP KPESNRYLLR LLGQAEEDWP NIVEDWYACF EVKLEATIAE EIGQELFNQL LSQAQNELGI PKKEHALKNP VVLQQIVEKA AAEGKESISL KGIVQKIIAL KSRQEESNDP QRV
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