Gene Daud_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0386 
Symbol 
ID6025641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp417361 
End bp418299 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content61% 
IMG OID641593234 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001716572 
Protein GI169830590 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID[TIGR02789] nickel ABC transporter, permease subunit NikB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTT ATCTCTTTAG GCGCATTTTG TACCTGCTTC CCGTAATGCT TGGAGTGTCC 
ATCATTACTT TCGCGTTGAT CAATCTTGCG CCGGGGGACC CGGCCGAGAT AATCCTGAGG
GCCGACGGGA TGGAGCCTAC CGCGGAGGCG GTGGCGGTTC TGCGGGAGGA GCTGGGCTTG
AACGATCCGC TTTACATCCA GTATGGGCGC TGGCTGTGGG GTGTGCTCCA CCTGGACCTG
GGCGAGTCGT TTCGCACGGG GCGTCCCGTG GCCGAAGAGT TGTTCTCACG TCTTCCGGCC
ACTCTGGAAC TGACATGCGC GGCTCTGGTA TTCATGGTGA TCCTTGCGGT ACCGGCCGGC
ATCCTGTCCG CCCTCTACCG GCACACCCTG GTCGATCACC TGGGCCGTCT GGGTGCCCTT
GCGGGGGCCT CGCTCCCCGG TTTTTGGCTG GGGCTCGTGC TCATCTACCT TTTTTCGGTG
AAGCTCGGAA TCTTGCCGGT GATGGGGCGG GGAGGACTTG AACACCTGGT GCTGCCCGCT
GTTACCCTGG GCTTCGGGAT GGCTGCCGTT TACGCCCGGG TCCTGCGGAC CGGAATGCTG
GATGTGCTGG GTCAGGACTA CATCAAGGTC GCCCGGGCCA AGGGGTTGAA GGAAAAGTGG
GTGATCGGGC GCCACGCCTT GAAGAACGCC CTTTTGCCCG CGGTGACGTT ACTGGGCATG
AGCTTCGGGC ACCTTTTGGG GGGAGCGGTA ATTGTGGAAA CCATCTTTGC CTGGCCGGGC
GTGGGAAAGT TTGCCGTGGA GTCCATCTTC AACCGGGACT ACCCGGTGAT CCAGGGATAC
GCCCTTTTCA TGGCCGTGGT CTTTGTGCTG GCCAACCTTC TGGTGGACAT ATCCTACGTT
TTCCTTGACC CGCGCATCCG CCTGGAAAGG GGGGAGTAG
 
Protein sequence
MKSYLFRRIL YLLPVMLGVS IITFALINLA PGDPAEIILR ADGMEPTAEA VAVLREELGL 
NDPLYIQYGR WLWGVLHLDL GESFRTGRPV AEELFSRLPA TLELTCAALV FMVILAVPAG
ILSALYRHTL VDHLGRLGAL AGASLPGFWL GLVLIYLFSV KLGILPVMGR GGLEHLVLPA
VTLGFGMAAV YARVLRTGML DVLGQDYIKV ARAKGLKEKW VIGRHALKNA LLPAVTLLGM
SFGHLLGGAV IVETIFAWPG VGKFAVESIF NRDYPVIQGY ALFMAVVFVL ANLLVDISYV
FLDPRIRLER GE