Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0386 |
Symbol | |
ID | 6025641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 417361 |
End bp | 418299 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641593234 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001716572 |
Protein GI | 169830590 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGTT ATCTCTTTAG GCGCATTTTG TACCTGCTTC CCGTAATGCT TGGAGTGTCC ATCATTACTT TCGCGTTGAT CAATCTTGCG CCGGGGGACC CGGCCGAGAT AATCCTGAGG GCCGACGGGA TGGAGCCTAC CGCGGAGGCG GTGGCGGTTC TGCGGGAGGA GCTGGGCTTG AACGATCCGC TTTACATCCA GTATGGGCGC TGGCTGTGGG GTGTGCTCCA CCTGGACCTG GGCGAGTCGT TTCGCACGGG GCGTCCCGTG GCCGAAGAGT TGTTCTCACG TCTTCCGGCC ACTCTGGAAC TGACATGCGC GGCTCTGGTA TTCATGGTGA TCCTTGCGGT ACCGGCCGGC ATCCTGTCCG CCCTCTACCG GCACACCCTG GTCGATCACC TGGGCCGTCT GGGTGCCCTT GCGGGGGCCT CGCTCCCCGG TTTTTGGCTG GGGCTCGTGC TCATCTACCT TTTTTCGGTG AAGCTCGGAA TCTTGCCGGT GATGGGGCGG GGAGGACTTG AACACCTGGT GCTGCCCGCT GTTACCCTGG GCTTCGGGAT GGCTGCCGTT TACGCCCGGG TCCTGCGGAC CGGAATGCTG GATGTGCTGG GTCAGGACTA CATCAAGGTC GCCCGGGCCA AGGGGTTGAA GGAAAAGTGG GTGATCGGGC GCCACGCCTT GAAGAACGCC CTTTTGCCCG CGGTGACGTT ACTGGGCATG AGCTTCGGGC ACCTTTTGGG GGGAGCGGTA ATTGTGGAAA CCATCTTTGC CTGGCCGGGC GTGGGAAAGT TTGCCGTGGA GTCCATCTTC AACCGGGACT ACCCGGTGAT CCAGGGATAC GCCCTTTTCA TGGCCGTGGT CTTTGTGCTG GCCAACCTTC TGGTGGACAT ATCCTACGTT TTCCTTGACC CGCGCATCCG CCTGGAAAGG GGGGAGTAG
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Protein sequence | MKSYLFRRIL YLLPVMLGVS IITFALINLA PGDPAEIILR ADGMEPTAEA VAVLREELGL NDPLYIQYGR WLWGVLHLDL GESFRTGRPV AEELFSRLPA TLELTCAALV FMVILAVPAG ILSALYRHTL VDHLGRLGAL AGASLPGFWL GLVLIYLFSV KLGILPVMGR GGLEHLVLPA VTLGFGMAAV YARVLRTGML DVLGQDYIKV ARAKGLKEKW VIGRHALKNA LLPAVTLLGM SFGHLLGGAV IVETIFAWPG VGKFAVESIF NRDYPVIQGY ALFMAVVFVL ANLLVDISYV FLDPRIRLER GE
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