Gene Daud_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0342 
Symbol 
ID6027164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp365321 
End bp366574 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID641593194 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_001716532 
Protein GI169830550 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR01885] ornithine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTTTCG TAGGAAGCCG TTTTGGGGAG CGGGAAGAGG AGTTGGTGGA TTTGGACCAG 
GAGGAGATTA TCACGCAGGC AGGGCGCTGC CTGATGCAGA CTTACGGCCG CCTGCCGCTG
GCCCTGGTGC GCGGCGAGGG TGCCTACGTC TGGGACGCCG CGGGCCGCCG GTACCTGGAC
TTCGTATCCG GTCTGGCCGT GAACGGCCTG GGCCACTGCC ACCCGCGGGT GGTCGAAGCG
ATACGGGCGC AGGCCGGAGT GCTCATGCAC TGCTCGAACC TGTACCACAT CGAACCGCAG
GTGCGCTTGG CCGGACTCCT GATCGAAAAC TCCGCGCTGG ACCGGGTTTT CTTCTGCAAC
AGCGGGGCGG AGGCGGTGGA GACGGCCATC AAGCTCGCCC GCAAGTGGGC CAAGAAGCGC
CACGGCCCGG AACGCTACGA GATCATCACC GCGCTGCAGT CTTTCCACGG CCGGACGCTC
GCGGCGATTG CCGCCACCGG GCAGCCCAAG TACCAGCAGG GGTTCGAGCC GCTGCCCCCG
GGTTTTAGCT ACGTCCCCTT CAACGACCTG GACGCCCTGC GGGCCGCCGT GGGGGAACAC
ACCTGCGCGG TGATGCTGGA ACCGGTCCAG GGCGAGGGCG GGGTGAACGT CGCCGCCCCG
GACTACCTGC CCGGGGTGCG CGCGCTCTGC GATGAACTCG GACTCCTGCT GATCCTGGAC
GAGGTGCAGA CCGGCATCGG CCGCACCGGG CGGTTCTTCG CGCACGAGCA CTACGGGATC
ACGCCGGACA TCATGTCCCT GGCGAAGTCG CTGGGGGCCG GGTTCCCGAT CGGCGCCGCC
CTGGCCCGCG AGGACGTGGC TGCCGCTTTC ACGCCGGGCG ACCACGCGTC GACCTTCGGA
GGCAACCCCC TGGCCTGCGC GGCCGCGACG GCCGCGGTGG AGACCATCCT GGAGAGCGGC
TTCCTCGACC AGGTGACGCG GACAGCCGGG CACTTCCGCC GCCGGCTGGA GGAATTGCGG
GCGCGTTTCC CCATGATCAA GGAGGTGAGG GGTCTCGGGA TGCTCATCGG CGCCGAACTG
AACCGCGACG CCGCCAAAGC CGTGCAGGGG CGCTGCCAGG AGTCGGGGCT TCTGATCAAC
GCCATCGGCG ACCGCATTCT CCGCTTCCTG CCGCCGCTGA CGGTGACCAC GGCCGAGGTG
GACGCGGCGG TGGACATCCT GACCACCGCT CTGGCCCAAG AAAGCGAGGG ATAA
 
Protein sequence
MTFVGSRFGE REEELVDLDQ EEIITQAGRC LMQTYGRLPL ALVRGEGAYV WDAAGRRYLD 
FVSGLAVNGL GHCHPRVVEA IRAQAGVLMH CSNLYHIEPQ VRLAGLLIEN SALDRVFFCN
SGAEAVETAI KLARKWAKKR HGPERYEIIT ALQSFHGRTL AAIAATGQPK YQQGFEPLPP
GFSYVPFNDL DALRAAVGEH TCAVMLEPVQ GEGGVNVAAP DYLPGVRALC DELGLLLILD
EVQTGIGRTG RFFAHEHYGI TPDIMSLAKS LGAGFPIGAA LAREDVAAAF TPGDHASTFG
GNPLACAAAT AAVETILESG FLDQVTRTAG HFRRRLEELR ARFPMIKEVR GLGMLIGAEL
NRDAAKAVQG RCQESGLLIN AIGDRILRFL PPLTVTTAEV DAAVDILTTA LAQESEG