Gene Daud_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0335 
Symbol 
ID6027186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp357635 
End bp358480 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID641593187 
Producthypothetical protein 
Protein accessionYP_001716525 
Protein GI169830543 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0491521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT CCCTCTTCGA AATCTTTTGG ATTCTCCTGA TCCTGGCGGC GCTTCTGCCG 
GTGGTCCGCC AGCGCCAGGT GCAGAAAGCC CGCATCAGGC TGATTCGCAA AATCGAAAGG
AAACGCGGCG CCCGCCTGAT CACCCTGATT CACCGGCAGG AACTGATCAG CCTGTTCGGC
ATTCCCCTCA CCCGGTACAT CAACGTTGAG GATTCCGAGC AAATCCTGCG GGCGATCCGG
CTCACGCCCC CGCACCTGCC GATCGACCTG GTGCTGCACA CGCCGGGCGG CCTGGTGCTC
GCCTCGGAGC AAATCGCCCG GGCGCTTTTG CGGCACCCGG CCAAGGTCAC GGTGCTGGTG
CCCCACTACG CCATGTCCGG GGGCACCATG ATCGCCCTGT CCGCCGATGA AATCATCATG
GATGAGAATG CCGTGCTCGG CCCCGTGGAC CCGCAACTCG GGCAATTCCC GGCGGCTTCG
ATTATGGAGG CGGTGCGCCG TAAAGGCGAC GAACGGGCCT CCGACCGTAC CCTGATTATG
GCCGACATCT CGGCCAAAGC CTTGAACCAG GTCGAAAACT TCGTCTACTG CCTGCTGGCC
GGGAAAATGG AAGAGCCCAC CGCTCGGGAG GTGGCGCACA CGCTCGCCTC CGGCCGGTGG
ACACACGACT TCCCGATCAC CGCCGAGAAA CTGCAGGCCC TGGGCCTCCC GGTCACCACG
GGGCTTTCCC GCGACATCTA CCTGCTGATG GAGATGTACC CCCAGCCGGC CCAGCGCCGC
CCCTCGGTGC AGTTCATTCC GGTGCCGTAC GAAGACGAGG ACGTAGAACG CCGCCCGCGC
CGGTGA
 
Protein sequence
MNLSLFEIFW ILLILAALLP VVRQRQVQKA RIRLIRKIER KRGARLITLI HRQELISLFG 
IPLTRYINVE DSEQILRAIR LTPPHLPIDL VLHTPGGLVL ASEQIARALL RHPAKVTVLV
PHYAMSGGTM IALSADEIIM DENAVLGPVD PQLGQFPAAS IMEAVRRKGD ERASDRTLIM
ADISAKALNQ VENFVYCLLA GKMEEPTARE VAHTLASGRW THDFPITAEK LQALGLPVTT
GLSRDIYLLM EMYPQPAQRR PSVQFIPVPY EDEDVERRPR R