Gene Daud_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0252 
Symbol 
ID6026665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp270226 
End bp270852 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID641593106 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001716445 
Protein GI169830463 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.65501e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAGAT ACACGGATGC GCGGTGCCGC TTGTGCCGCC GCGAAGGAAC CAAGCTTTAC 
TTGAAGGGGG ACCGCTGTTA TTCTCCCCGG TGCGCGGTCG ACCGCCGGCC CGCCCCGCCC
GGACAACACA CTCCTTCCCG CCGGAAGGTT ACGGAGTTCG GGATCCAGTT GCGCGAAAAG
CAAAAAGTAA GGCGGATTTA CGGAGTCCTG GAGTCCCAGT TTCGGAACTA CTTCCACAAG
GCCGAGCGTC AGCCGGGGGT GACCGGTGAG AACCTGTTGC GCCTGTTAGA GCTGCGGTTG
GACAATGTGA TCTACCGTCT GGGCCTTGGG GCGTCGCGGG CGGAGGCGCG CCAGCTGGTC
AGGCACGGCC ATTTCAAGGT TAACGGGCGC AAGGTTGACA TTCCCTCTTA CCAGGTGCGT
GTCGGCGACG TGATCGCGGT GCGCGAGCGG AGCAAAGGGC TGACGCGGAT ACAGGAACTC
CTGGACCGGG CGTCCGAGAA CAATCCCCCC GCCTGGCTGG AGTACGACGG CGAACGGGCC
GTGGCCCGGG TTGTGGCCTT ACCCACCCGG GAGAATATCG ACATCCCGGT CCGGGAGCAA
CTGGTGGTCG AGCTGTATTC CAGGTAA
 
Protein sequence
MARYTDARCR LCRREGTKLY LKGDRCYSPR CAVDRRPAPP GQHTPSRRKV TEFGIQLREK 
QKVRRIYGVL ESQFRNYFHK AERQPGVTGE NLLRLLELRL DNVIYRLGLG ASRAEARQLV
RHGHFKVNGR KVDIPSYQVR VGDVIAVRER SKGLTRIQEL LDRASENNPP AWLEYDGERA
VARVVALPTR ENIDIPVREQ LVVELYSR