Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0228 |
Symbol | rplB |
ID | 6027239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 259320 |
End bp | 260147 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641593082 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001716421 |
Protein GI | 169830439 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.728905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGACCA AAAAGTTTAA ACCGACTTCC CCCGGACGCC GTTTCGTAAC CGTTTCCGAT TTTCGTGAAG TCACGGTAAC GGAACCGGAG AAATCCCTGG TGGAGCCGCT GCGGAAAAAG GCCGGCCGGA ACTTCCAGGG CCGGGTCACG GTGCGGCACC GGGGAGGCGG GCACAAGCGG CTGTACCGGG TGATTGACTT CAAGCGGAAT AAGGACGGCG TACCGGGCAA GGTGGCAACC ATCGAATACG ATCCGAACCG CTCGGCGAAC ATCGCGCTGG TGAACTACGC CGACGGTGAG AAGAGGTACA TCGTCGCCCC GGCGGGCTTA AAGGTCGGGC AGGAAATAAT GTCCGGTCCC CAGGCCGATA TCAAGGTCGG CAACGCGCTG CCCCTGCGCA ACATCCCGCC GGGGGTGCTC ATTCACAACA TCGAGCTTTA TCCCGGGCAC GGGGCCCGGG TGGTCCGGTC CGCCGGGGGC TCGGCCCAAC TGATGGCCAA GGAGGGCGAC TACGCCCATG TCCGTCTGCC TTCGGGCGAG GTACGGCTCT TCCCCCTGGA CTGCCGGGCG ACCATCGGCC AAGTGGGCAA CGTCGAGCAC GAGAACATCG TTATCGGCAA GGCCGGGCGG GCGCGCTGGC TGGGCATCCG TCCGACCGTA CGGGGCGTCG TAATGAACCC GGTCGATCAT CCCCACGGCG GCGGCGAGGG CCGCTCACCG ATCGGACGCC CCCCGGTTAC CCCCTGGGGT AAACCGGCGC TGGGTACCAG AACCCGGAAC AAGAAAAAGG CCAGCAGCAA GCTGATTGTC AAGCGGCGCA CTAAGTAA
|
Protein sequence | MATKKFKPTS PGRRFVTVSD FREVTVTEPE KSLVEPLRKK AGRNFQGRVT VRHRGGGHKR LYRVIDFKRN KDGVPGKVAT IEYDPNRSAN IALVNYADGE KRYIVAPAGL KVGQEIMSGP QADIKVGNAL PLRNIPPGVL IHNIELYPGH GARVVRSAGG SAQLMAKEGD YAHVRLPSGE VRLFPLDCRA TIGQVGNVEH ENIVIGKAGR ARWLGIRPTV RGVVMNPVDH PHGGGEGRSP IGRPPVTPWG KPALGTRTRN KKKASSKLIV KRRTK
|
| |