Gene Daud_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0228 
SymbolrplB 
ID6027239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp259320 
End bp260147 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID641593082 
Product50S ribosomal protein L2 
Protein accessionYP_001716421 
Protein GI169830439 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.728905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCA AAAAGTTTAA ACCGACTTCC CCCGGACGCC GTTTCGTAAC CGTTTCCGAT 
TTTCGTGAAG TCACGGTAAC GGAACCGGAG AAATCCCTGG TGGAGCCGCT GCGGAAAAAG
GCCGGCCGGA ACTTCCAGGG CCGGGTCACG GTGCGGCACC GGGGAGGCGG GCACAAGCGG
CTGTACCGGG TGATTGACTT CAAGCGGAAT AAGGACGGCG TACCGGGCAA GGTGGCAACC
ATCGAATACG ATCCGAACCG CTCGGCGAAC ATCGCGCTGG TGAACTACGC CGACGGTGAG
AAGAGGTACA TCGTCGCCCC GGCGGGCTTA AAGGTCGGGC AGGAAATAAT GTCCGGTCCC
CAGGCCGATA TCAAGGTCGG CAACGCGCTG CCCCTGCGCA ACATCCCGCC GGGGGTGCTC
ATTCACAACA TCGAGCTTTA TCCCGGGCAC GGGGCCCGGG TGGTCCGGTC CGCCGGGGGC
TCGGCCCAAC TGATGGCCAA GGAGGGCGAC TACGCCCATG TCCGTCTGCC TTCGGGCGAG
GTACGGCTCT TCCCCCTGGA CTGCCGGGCG ACCATCGGCC AAGTGGGCAA CGTCGAGCAC
GAGAACATCG TTATCGGCAA GGCCGGGCGG GCGCGCTGGC TGGGCATCCG TCCGACCGTA
CGGGGCGTCG TAATGAACCC GGTCGATCAT CCCCACGGCG GCGGCGAGGG CCGCTCACCG
ATCGGACGCC CCCCGGTTAC CCCCTGGGGT AAACCGGCGC TGGGTACCAG AACCCGGAAC
AAGAAAAAGG CCAGCAGCAA GCTGATTGTC AAGCGGCGCA CTAAGTAA
 
Protein sequence
MATKKFKPTS PGRRFVTVSD FREVTVTEPE KSLVEPLRKK AGRNFQGRVT VRHRGGGHKR 
LYRVIDFKRN KDGVPGKVAT IEYDPNRSAN IALVNYADGE KRYIVAPAGL KVGQEIMSGP
QADIKVGNAL PLRNIPPGVL IHNIELYPGH GARVVRSAGG SAQLMAKEGD YAHVRLPSGE
VRLFPLDCRA TIGQVGNVEH ENIVIGKAGR ARWLGIRPTV RGVVMNPVDH PHGGGEGRSP
IGRPPVTPWG KPALGTRTRN KKKASSKLIV KRRTK