Gene Daud_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0223 
Symbol 
ID6027287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp256135 
End bp257337 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID641593077 
Productelongation factor Tu 
Protein accessionYP_001716416 
Protein GI169830434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.834398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAC CCAAGTTTGT GCGTACCAAG CCGCACGTAA ACGTCGGCAC GATCGGCCAC 
GTGGACCACG GCAAGACCAC GCTGACGGCG GCGATCACCC TGGTCCTGTC CAAGTTGGGT
CAGGCCGAGT ACAAGAAATA CGACGACATC GACGCGGCGC CGGAGGAGAA GGCGCGCGGC
ATCACCATCA ACACCGCGCA CGTGGAATAC GAGACCGAGA AGCGGCATTA CGCGCACGTG
GACTGCCCGG GGCACGCCGA CTACATCAAG AACATGATTA CCGGCGCGGC CCAGATGGAC
GGGGCGATTC TGGTGGTCTC GGCGGCCGAT GGCCCCATGC CCCAGACCCG TGAGCACATC
CTCCTGGCTC GCCAGGTGGC CGTGCCCTCC ATCGTGGTCT ACCTGAACAA GGCCGACATG
GTCGACGATC CGGAGTTATT GGAACTGGTC GAGATGGAAG TGCGCGAGCT TTTGTCCAAC
TACGAGTTTC CGGGAGACGA CACCCCGATC GTCACCGGAT CCGCCCTAAA AGCCCTGGAA
TGCGGCTGCG CCAACCGGGA GTGCGCGCAT TGCAAGTCCA TCTGGGAGTT GATGGACGCC
GTTGACAACT ACATTCCGAC GCCTGAGCGT GACATCGACA AGCCCTTCCT GATGCCGGTC
GAAGACGTAT TTTCCATCAC CGGGCGCGGC ACGGTGGGCA CCGGCCGGGT GGAGCGGGGC
ACCGTGAAGA CCGGGGACGA GGTCGAGATC GTTGGTTTCG CGGCCAAGCC GCGCAAGACT
GTGGTTACGG GGGTGGAGAT GTTCCGCAAG GTTCTGGACT ATGCCCAGGC CGGAGACAAC
GTGGGTTGCC TGTTGCGGGG TGTGGACCGT ACCGAGCTTG AGCGGGGCCA GGTATTGGCA
AAGCCGGGAT CCATCAAGCC GCTGACCGAA TTTACGGCCA ACGTGTACGT GCTGAGTAAA
GAAGAAGGTG GGCGTCACAC CCCGTTCTTC AACGGATACC GTCCGCAGTT CTACTTCCGG
ACCACCGACG TGACCGGCGT GATTCATCTG CCGGAAGGCG TGGAGATGGT GATGCCTGGG
GACAACCTGC AGATGGACGT CAGCCTGATC ACCCCGATCG CCATCGAAGA AGGCTTGCGG
TTTGCCATCC GCGAGGGCGG CCGCACGGTG GGCGCCGGCG TGGTCACGGG GATAAAGGGA
TAA
 
Protein sequence
MAKPKFVRTK PHVNVGTIGH VDHGKTTLTA AITLVLSKLG QAEYKKYDDI DAAPEEKARG 
ITINTAHVEY ETEKRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVAVPS IVVYLNKADM VDDPELLELV EMEVRELLSN YEFPGDDTPI VTGSALKALE
CGCANRECAH CKSIWELMDA VDNYIPTPER DIDKPFLMPV EDVFSITGRG TVGTGRVERG
TVKTGDEVEI VGFAAKPRKT VVTGVEMFRK VLDYAQAGDN VGCLLRGVDR TELERGQVLA
KPGSIKPLTE FTANVYVLSK EEGGRHTPFF NGYRPQFYFR TTDVTGVIHL PEGVEMVMPG
DNLQMDVSLI TPIAIEEGLR FAIREGGRTV GAGVVTGIKG