| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0220 |
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| Symbol | rpsL |
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| ID | 6027301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 253154 |
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| End bp | 253528 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593074 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001716413 |
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| Protein GI | 169830431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000630102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGACGA TCAGTCAATT GATACGCCGG GGCCGGGAAA CCGTAGCTCA AAAATCGGCC
TCGCCGGCAC TCAGGGAGTG CCCGCAGAAG CGCGGGGTCT GCACGCGCGT GTACACCACA
ACGCCCAAGA AGCCGAACTC AGCGCTGCGT AAAGTGGCCC GTGTCCGTCT GACCAATGGG
TATGAGGTCA CCACGTACAT TCCGGGTATC GGACACAACC TGCAGGAGCA CTCGGTGGTC
CTGGTCCGGG GTGGCCGGGT CAAGGACCTG CCCGGAGTGC GTTATCATAT CGTCCGCGGG
GCCCTGGACA CCGCCGGGGT CCAGAACCGG AACCGGGGGC GTTCCAAATA CGGGGCCAAG
AGGCCCAAGA AGTAA
|
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| Protein sequence | MPTISQLIRR GRETVAQKSA SPALRECPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
YEVTTYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG ALDTAGVQNR NRGRSKYGAK
RPKK
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