| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0118 |
|---|
| Symbol | |
|---|
| ID | 6025701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 127568 |
|---|
| End bp | 129241 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641592971 |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_001716318 |
|---|
| Protein GI | 169830336 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCCG ATATCGAAAT CGCACAGCGT GCCAAACTCA AACCTATAAT CGAGGTGGCG
CGCGATCTGG GTTTGGCCGA AGAAGATTTG GAGCTTTACG GGAAATACAA GGCCAAGGTC
GACAACGGCC TCTGGGAACG CCTACGGGAT CGCCCGCCGG GCAAGCTGAT TTTTACGACC
GCAATCACCC CTACGCCGGC GGGGGAAGGT AAGACCTGCA CGGCCATCGG ACTCACGCAG
GCCCTGGGCC GGCTGGGCAA GAAGGTGACG GTCTGCCTGC GGGAACCGTC AATGGGCCCC
ACTTTCGGAG TCAAAGGGGG TGCGGCCGGC GGGGGATACT CGCAAGTTCT GCCCATGGAA
GACATCAATC TTCATTTCAC CGGAGACATT CACGCGGTCA CCGCGGCGCA CAACGTGCTG
GCGGCGGTGG TGGATAACCA CATCTTCCAG GGCAACAGCC TGAACATCGA TCCCAAACGG
GTGCTTTGGC GCCGGGTGGT CGATGTGAAC GACCGGCAAC TGCGCAACGT TGTCTGCGGC
CTTGGCAACA GGGTCGATGG TATACCACGC GAAAGCGGAT TTGACATTAC CGTGGCCTCC
GAGATCATGG CGCTCCTGTG CCTGGCCGAA GGGTTGCAGG ATTTTAAGGA ACGGGTCGGG
AACGTCCTGG TGGCGTACAC CCGCGACGGT CGGCCGGTCT TCGCGCGCGA CCTGAAAGTG
GCCGGGGCGT TGGCCGTGAT AATGAAAGAC GCCCTGAAAC CCAACCTGGT GCAAACAGTG
GAAGGACAGC CGGCGTTTGT CCATGGCGGC CCCTTTGCCA ACATCGCCCA CGGCAACAAC
TCCATCCTCG CCACGCGGCT GGCTCTGCGG CTGGCCGACT ACGTGGTGAC CGAGGGCGGG
TTCGGCTCCG ACCTGGGCGC CGAGAAGTTC TTCGACATCG TGTGCGGCTA CGGTGGTTTT
CAGCCGGACG CGGTGGTCCT GGTGGCCACC GTGCGGGCCC TCAAAATGCA CGGGGGACTC
CCCCTCGCCG ACGTCACCCG GCCGGACGTC GAGGCTCTCG GGGCCGGCCT GGCCAACCTC
GACGCCCACA TCGACAACGT CACGGGCAAC TTCAACTTGC CGGTGGTGGT GGCGGTCAAC
CGCTTTCCCA CGGACGCGGA GGTCGAGCTG AACCTGATTC GGGAACACTG CCTGGCCCGC
GGCATCCCGG TCGCGGTCTC CGAAGTGGTC GCCCGCGGCG GCGAGGGCGG CCTGGAACTG
GCGGAAAAGG TGCTGGCCAT CCTGGCGCGC GCCCCGAGGG GCTTTCGTCC ACTGTACGAC
TGGAACCTGC CCATCAGAGA AAAGATCGAT ATCCTCGCCC GCAGAGTTTA CGGGGCGGAT
GGAGTAGTCT TTACGGACCA GGCGCAAGCC GATATCGAAA CCTTCACCCG GTTGGGTTTC
GACAAGCTGC CGATATGCAT GGCCAAGACC CAGAGTTCAC TTTCCGACAA TCCCCGGCTT
CTGGGTCGCC CGAAGGGATG GCTTCTTACC GTGCGCGAGG TGCGCGCTTC GGTGGGTTCC
GGCTTCCTGG TCGCCTTGGC AGGAAAAATC ATGACCATGC CCGGGCTGCC CCAGGTGCCG
GCGGCGGAGA AGGTTGACAT CGACCCCGCC GGCAATGTGG TTGGATTGTT CTAG
|
|---|
| Protein sequence | MLSDIEIAQR AKLKPIIEVA RDLGLAEEDL ELYGKYKAKV DNGLWERLRD RPPGKLIFTT
AITPTPAGEG KTCTAIGLTQ ALGRLGKKVT VCLREPSMGP TFGVKGGAAG GGYSQVLPME
DINLHFTGDI HAVTAAHNVL AAVVDNHIFQ GNSLNIDPKR VLWRRVVDVN DRQLRNVVCG
LGNRVDGIPR ESGFDITVAS EIMALLCLAE GLQDFKERVG NVLVAYTRDG RPVFARDLKV
AGALAVIMKD ALKPNLVQTV EGQPAFVHGG PFANIAHGNN SILATRLALR LADYVVTEGG
FGSDLGAEKF FDIVCGYGGF QPDAVVLVAT VRALKMHGGL PLADVTRPDV EALGAGLANL
DAHIDNVTGN FNLPVVVAVN RFPTDAEVEL NLIREHCLAR GIPVAVSEVV ARGGEGGLEL
AEKVLAILAR APRGFRPLYD WNLPIREKID ILARRVYGAD GVVFTDQAQA DIETFTRLGF
DKLPICMAKT QSSLSDNPRL LGRPKGWLLT VREVRASVGS GFLVALAGKI MTMPGLPQVP
AAEKVDIDPA GNVVGLF
|
|---|
| |