| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0093 |
|---|
| Symbol | |
|---|
| ID | 6027181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 98803 |
|---|
| End bp | 100074 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641592946 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716293 |
|---|
| Protein GI | 169830311 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCA AAAAGCTGAG TGAAGTGAGA GACCCCAATT TCAGGGACGA AATATCCCAA
AAGATGTGCT TTCACACCGA GGAAGGCAAG TTCGACCTGA ACTACTGCCT GGCTTGCGGT
ACCTGTGCGG CGGCGTGCTA CTTCACCGAT CTGGTGGAGA ACCACGACCC GCGCAAGTTC
ATGCGCAAGG TCGCCCTCGG GCTGAAGGAC GAAGTGCTGA ACGACAGGTT CGTCTGGCTG
TGCAACATGT GCGGCCGGTG CACCATGCAC TGCCCCGGCA AAGTGCCGCT GCCGGCTGTG
GTGCGCACGG TACGCGGGCA GTTCGGCCTG ACCGCCCCCG GGCGGCTCCA GGAAGTGGCC
GACCTGCATA TGCGAGTCGG GAACCAGATG GAGATCACCG AAGAGGAGTT CATGGAGACC
ATCGAGTGGA TGCAGGAGGA ACTCCAGGAA GAGTTCGGCG ACTCGAGCCT GACCATTCCG
GTCAACGTGG AGGGCGCCGA GATCCTGTTC CTCCCGCACC CGCGCGAGAT CAAGTACTAC
CCGGAGGACA TCAAGAGCTG GACCAAGATC TTCTGGAACG CCAAGGAGAG TTGGACGTTA
TCCTCCAAGG CCTTCGACGT CACCAACTTC GGGCTGTTCA ACGGCCGGGA CGACGAGGCC
AAGAAGATCA TGGACTTTGT GGTGGACGAG ATGAGAAGGC TCGGCGTGAA GCGCTGCGTC
ATGACCGAAT GCGGCCACGG GTACTGGGCC TTTGTGTGGG GCAAGAAGGT CTGGTACAAG
GAAGGCGAGG TGCCTTGGGA GTTCGAGCAC ATGGTGGGTT GGATGGCCAA CCTGATCAAG
ACCGGCAAGA TTAAGGTCGA TAAGACCAAG AACCCCTACG TGGTCACCAT TCACGACCCG
TGCAACACGG TGCGCAAGGG CGGTCTTATC GAAGAGGGCC GGTACATTTT AGAGAACGTG
GCCGAGAAGT TCGTGGACAT GTGGCCGAAC CGGGAGTACA ACTACTGCTG CGGCGGTGGT
GCCGGCGCTC TGCCGATGGG CACCGTGGTG AAAAAAGAGC GGATGGCCAA GGGTAAGCTT
AAAGCCGACC AGATGATGGC CACCGGCGCC GAGATCTGCT GCGCGCCCTG CCACAACTGC
TACGACCAGC TGAACGACAT CAATAAAGAA TACAACCTCG GAATGAAGAT CAAGCACCTG
CATCACCTGG TGGAGCACGC CCTGATCTGG CCCGAGGACG GACCCCGGCC GAAGCAGGAA
GAAGAGGAGT AA
|
|---|
| Protein sequence | MEAKKLSEVR DPNFRDEISQ KMCFHTEEGK FDLNYCLACG TCAAACYFTD LVENHDPRKF
MRKVALGLKD EVLNDRFVWL CNMCGRCTMH CPGKVPLPAV VRTVRGQFGL TAPGRLQEVA
DLHMRVGNQM EITEEEFMET IEWMQEELQE EFGDSSLTIP VNVEGAEILF LPHPREIKYY
PEDIKSWTKI FWNAKESWTL SSKAFDVTNF GLFNGRDDEA KKIMDFVVDE MRRLGVKRCV
MTECGHGYWA FVWGKKVWYK EGEVPWEFEH MVGWMANLIK TGKIKVDKTK NPYVVTIHDP
CNTVRKGGLI EEGRYILENV AEKFVDMWPN REYNYCCGGG AGALPMGTVV KKERMAKGKL
KADQMMATGA EICCAPCHNC YDQLNDINKE YNLGMKIKHL HHLVEHALIW PEDGPRPKQE
EEE
|
|---|
| |