Gene Daud_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0086 
Symbol 
ID6026981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp88288 
End bp89700 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content68% 
IMG OID641592939 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001716286 
Protein GI169830304 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain
[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGC AGGACCGGGT ACAACAGTAC ATACTCCGGC ACCGGATGCT GGAGCCGGGA 
ATGGGCGTAC TGGTAGGAGT TTCCGGGGGC CCGGACTCGG TGGCCCTGCT GGACGTCCTT
TACGGCTTGC GTGCCGTATT GGGTATTTCC ATCACGGTGG CCCATCTGAA CCACCGGCTG
CGGGGCGCCG AGGCCGAAGC GGACGCCCGT TACGTTCGGA AACTGGCCGA AAAGTTCGGT
CTGCCTTGTA TCGTCGAGGA ATGTGACGTG CCGACCTTTC GGAAAGCCGA ACGTCTCTCC
ATCCAGACGG CAGCGCGGGA ACTCCGGTAT GAGTTCTTTG CCCGGGCGGC CCGGGAGACC
GGGGCCCGGC GGGTGGCCCT CGGCCACCAC GCGGACGACC AGGCGGAGAC CATCCTGCAC
CACTTTCTCC GCGGCACCGG ACCGGCCGGC CTGGCCGGCA TCGCGCCGGT CAGGGGCCTT
TTCATCCGGC CCCTGCTCGG CATCCGGCGC CGGGAGATCG AAGCCTACTG CCGCGCCCGG
GGTCTCGACC CCCGGCTTGA CCCTTCCAAC CTCGATCCCG TCTACACCCG GAACCGGCTG
CGGGCCGAAC TCCTGCCCCT GCTTGAAACC GAATACAACC CGAATTTGGT GACGGCCCTG
TTGCGCCTGG GCGAGATCTG CCGGGCGGAA AACGACTACA TGGAGGAACA AACGGAGACC
ATCTTCCGGC GATCGGCTGC GCCGACGGAC GGCTGTGTCC GGCTCGACGC GGATAGGGTG
GCCGCCCTGC CCCCGGCGAT CGGGCGGCGG ATGATCCGCA GGGCGTGGTC GGAGCTGGCC
GGGGACCCGG GGGCGCTCGA TTTCGACCAT GTGGAACGGG TCCTCGAACT GGCCCGCGCC
GCGGCCGGCG GCAAACGGCT GGACCTGCCG CGGGGAATTC GGGTGGAAAG ACAGTTTGCC
GCGCTGGTTT TCAGCCTAGG CCCCGACCCG GCCGAATACG GAGCGTGGCA CTATGTGCTG
GTGGTTCCCG GTCGGACGGA GCTGCCGGAG GTCGGGCTGC TGATCACCAC CGACATCCGG
CCCGCGGAAC AGGCCTGGCG ACCGGAAACG CTCCAACCCG GGCAGGCGGC GGTGGACCTC
GACACCCTGA CCCTGCCGCT GGTCGTCCGC AACCGCAGGC CCGGAGACGT GTTTTGGCCG
CAGGGGGCCG GCGGCCGGAT GAAACTGAAA GAGTTCCTGA TTAACAATAA AGTGCTCCGG
CCGGAGCGGG ACCGGATTCC GCTGGTCTTT GACGGCGAGG GCCGCCTGGT CTGGGTGGCC
GGCTACCGGA TCGCCGAGTT CTGCAAGCTG ACCCCCGGGA CCCGTTCGGT GCTGCTCCTG
ACCGTCTCGG AGCCCGGCCC CGGCGTGGTT TGA
 
Protein sequence
MDLQDRVQQY ILRHRMLEPG MGVLVGVSGG PDSVALLDVL YGLRAVLGIS ITVAHLNHRL 
RGAEAEADAR YVRKLAEKFG LPCIVEECDV PTFRKAERLS IQTAARELRY EFFARAARET
GARRVALGHH ADDQAETILH HFLRGTGPAG LAGIAPVRGL FIRPLLGIRR REIEAYCRAR
GLDPRLDPSN LDPVYTRNRL RAELLPLLET EYNPNLVTAL LRLGEICRAE NDYMEEQTET
IFRRSAAPTD GCVRLDADRV AALPPAIGRR MIRRAWSELA GDPGALDFDH VERVLELARA
AAGGKRLDLP RGIRVERQFA ALVFSLGPDP AEYGAWHYVL VVPGRTELPE VGLLITTDIR
PAEQAWRPET LQPGQAAVDL DTLTLPLVVR NRRPGDVFWP QGAGGRMKLK EFLINNKVLR
PERDRIPLVF DGEGRLVWVA GYRIAEFCKL TPGTRSVLLL TVSEPGPGVV