| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0085 |
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| Symbol | |
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| ID | 6026941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 85780 |
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| End bp | 88200 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641592938 |
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| Product | phosphoprotein phosphatase |
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| Protein accession | YP_001716285 |
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| Protein GI | 169830303 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGATC ATTCGAACGC CTATCAGGTA CGGCAGCGAA CCGGCGAATG GGCCGGAGTG
GGTATTCCGC GCCGCTATCG CCGCCGGCCG CCCATCCGGC CGGCCTGGGG ACGGGCCCTG
GATCTACTGC ACTGGCAGAA GCTAGGGCTT ATTATTTTGG CCTTCTTCCT GGGCCGGACC
GTGCTGCTCG GGGAACTCAG CCCCTTTGTG ATTGCCTTTG CGGGCGTGGC CGTCCACCTC
TTTGGACCCT GGGGCTGGCC GGCGGTGTTC GCCGGTATCG CCGGGCAAGC CACGGTCCTG
ATTTGGTCCG AACTGGCGCC GGTGCTTCTG GTCCTGGGCG CCGTCGGGCT GGGCCTCAGG
ACGATTCCGG CCGACTTCCG GCGGCCCCGG GTGGCGGTGG CGGTACTGGT CGCGACGGCG
ACGGTGGTGA TCAAGGGTTC ATACCTGGCC TTTTCAGGAG CGGTGCTGTA CGAGTACGTG
GCCGTGTTCT TCGAAAGCCT GCTGGCCGGG ACGCTCGCCT ACGTGTTCCT GATCGCGCTT
TCACCGCGTT CCCGCCCGCT GACAGTGGAA AATTTCTTTT GTGTACTGGT GCTCCTGGCG
GCGGCGGTGG CCGGCACCGG AAACCTGGGC TGGGGCCTGT TCTCACTGCA CGGCTTCCTG
AGCAAGTTTA CAATCCTGGT CGCCGCCGGG TTGGGCGGGG CCGGGTTGGG TGCCGCCGCC
GGGGCGGTGG TGGGGATCAT CCCCGGTATC GCCTACACCG TGATGCCGGC GGTCGCGGGG
GTGTACGCTT TTGCCGGATT TCTGGGCGGC GCCTTCCGGC ACTTCGGCAA GCCGGGGGTG
GCCGCCGGTT TTCTGCTGGG CAACATTCTG CTGGCGGTAT ACATCGGTGA GCACCGGGAA
CTGGTGGGAG TACTGGCGGA GGCCGGGGCG GCGGCGGCCC TATTCGCGGT GATTCCGGCG
AAGTGGTATC AGGAGCTGCG CTCCCTGATT CCGGGCGGGA TCGCCGGTAC GGCCGTTTCC
GAGGAGCGGA TCCAGGAGTT GGTCCGGAAC AGGGTGCGCA GCTGGGCCCG CATGTTTGCA
GAGCTGGCCC GCACCTTTGC CCAGGTTTCA CCTGCGGGGC TGGAGCCCGG AACCGAAAAA
CCGTTGCGTG AGCTGTTGAA CGAGGTCGGG AACCGCATCT GCAAGGACTG CAACCTGCAC
CGGAGTTGCT GGGAGCGGGA CGCGGATCGC ATCAACGAGC AATTCGCAGC CACGCTGGCT
CAGGTTGAGG CTTCCGGCCG GGTGGGCCCG GAGGACTTCC CGGAAGAAAT CCGGCGGAAA
TGCCTGCGGC AAAAGGAAAT GGCGGTCGCT CTCACCTGCC TTTACGAGAC CTACCGGGTG
AACCGGTACT GGTACCGGAG GCTGGTAGAG AGCCGCGAAG TCGTGTCCGA ACACTTGCGC
GGCCTGTCCC GGATTATGAA CAACCTGGCC ACCGAACTGT GCAGCGCCGT GGAACGGGCC
GGCCAGCTGG AAGGCCTGCT GCGCCGGAAG CTGCGGGAGT TAGACGTGCC CGTCCACCGC
ATCGAAACCC GGCACCGGGA AGACTCCCGG TTGGAGATCA TCATCAGCCG CCCCTCCTGC
CGGAGTGAAC TGGCCTGCCG GTACGTGGTG GCCCCGCTGG TTTCACGGGT GGTCGGCCAG
CCGTTCATGG TCAGCGACAC CAGTTGCACC CGGGAGGAGA ACGCTGCCGA CTGCACCTTC
CGGCTGCAGC CGGCCCTCCG CTACCGGGTG GCGGTCGGGC TGGCCCAGGT GGGTAAGGCC
GGGAGCACCA TATCGGGGGA TACCGCCTCC TACCTGGAAC TGGAATCCGG AAAATTCTTC
CTGCTTTTGA GCGACGGGAT GGGAGTGGGT TCTCAGGCCG CGCTGGAAAG CAGCACCACT
GTTTCCCTGC TCGAGCACAT GTTCCGGGCC GGCTTCGGCA AGGATATGGC CGTGAAAATA
GTGAACTCGA TCCTGCTTCT GCGGGCGCCG GACGAGAGTT TCGCCACCGT GGACCTGGCG
GTCATTGATC TCTACACGGC GCAGGCCGAA TTCATTAAGA TCGGGGCGGC GCCGGGTTTC
GTGGTCGGCG CCAACACGGT GAGTGTGATT GAGAGTACCG CTCTGCCGGT GGGCATCATC
AAGGAGATCG ACTTCACCCC GGTGGTGTGC GGACTGGCGG CGGGCGACCT GGTGGTGATG
GTCACCGACG GGGTGCTGGA CTGCTACCGG GGTCCGCTGG AGAAGGAAAC GTGGCTTGGG
GAGCTTCTCC GGGACCTGCC GCGGACCGAT CCCCAACGGT TGGCCGAGCT GATACTGCAG
CAGGCCCGGC ACGCCGCCGG CAAGAGCATT CCCGACGACA TGACGGTCCT GGTCGGGAGA
ATGGAAGAGG CTGGGCCTTA G
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| Protein sequence | MADHSNAYQV RQRTGEWAGV GIPRRYRRRP PIRPAWGRAL DLLHWQKLGL IILAFFLGRT
VLLGELSPFV IAFAGVAVHL FGPWGWPAVF AGIAGQATVL IWSELAPVLL VLGAVGLGLR
TIPADFRRPR VAVAVLVATA TVVIKGSYLA FSGAVLYEYV AVFFESLLAG TLAYVFLIAL
SPRSRPLTVE NFFCVLVLLA AAVAGTGNLG WGLFSLHGFL SKFTILVAAG LGGAGLGAAA
GAVVGIIPGI AYTVMPAVAG VYAFAGFLGG AFRHFGKPGV AAGFLLGNIL LAVYIGEHRE
LVGVLAEAGA AAALFAVIPA KWYQELRSLI PGGIAGTAVS EERIQELVRN RVRSWARMFA
ELARTFAQVS PAGLEPGTEK PLRELLNEVG NRICKDCNLH RSCWERDADR INEQFAATLA
QVEASGRVGP EDFPEEIRRK CLRQKEMAVA LTCLYETYRV NRYWYRRLVE SREVVSEHLR
GLSRIMNNLA TELCSAVERA GQLEGLLRRK LRELDVPVHR IETRHREDSR LEIIISRPSC
RSELACRYVV APLVSRVVGQ PFMVSDTSCT REENAADCTF RLQPALRYRV AVGLAQVGKA
GSTISGDTAS YLELESGKFF LLLSDGMGVG SQAALESSTT VSLLEHMFRA GFGKDMAVKI
VNSILLLRAP DESFATVDLA VIDLYTAQAE FIKIGAAPGF VVGANTVSVI ESTALPVGII
KEIDFTPVVC GLAAGDLVVM VTDGVLDCYR GPLEKETWLG ELLRDLPRTD PQRLAELILQ
QARHAAGKSI PDDMTVLVGR MEEAGP
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