Gene Daud_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0051 
Symbol 
ID6027225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp56360 
End bp57262 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID641592905 
ProductAllergen V5/Tpx-1 family protein 
Protein accessionYP_001716252 
Protein GI169830270 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID[TIGR02909] uncharacterized protein, YkwD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.68583e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCTG TGAACAAAAA GCTCGCCGTT GCAGTGGTAG CCCTGATGTT GTCCGTCGCC 
CTGTTGATTC CGGCCACCCT GGCCCACGCC AACGCACCTT CTGCGGAAGA AAGCAAGTTG
ATCACGGGAA TAAACCAGGC CCGCCAGAAG GCGGGGGTTC AGCTTCTAAC CAATAGCGCC
CGTTTGAACG AGGTGGCCCT GACCCTCCTG ACGAACGGAA CCAGCGTATC GCTGGCGTTG
CGGGAGCAAG GAATCACCTA CCGGTCCGCC TGTACGCTGC GTGTAGGCTC CGGCAACGCG
GATCTGGTGG TCCGGGCTTT GACCGGATAC AGCTCGTCAC AGGTCTTGCA GCCGCAGTAC
AATCAGATCG GTGTAGCTAT CCGGAATAAC ACCACGGTGA TCGTTCTAAT CAACGGGGTT
ATTGCCGCGC AGCCGGCACC GCAAACGGCC CCGACTCCGG CACCGCAACC CGCGCCGTCG
CCGGCTCCCA TGCCGTCACC CGGCCCCTCC GGTTTGATGA CCGCGTACGA GATGAAGATA
GTTGAACTGG TGAACGCCGA GCGGGCTAAG CTCGGACTGA GGGCTCTGGC GGTTGACGCC
AAGCTGTCGC AAGTGGCCCG ATTAAAGTCC GAGGACATGC GGGACAAGCG CTATTTTGCC
CATCAATCTC CCACCTACGG TTCGCCGTTT GACATGATGA GACAGTTCGG AATTACCTAC
CGCACGGCCG GTGAGAATAT CGCCGCCGGC CAGCGTACCC CGGAAGAAGC CATGCGTGGG
TGGATGAACT CCTCCGGGCA CCGGGCCAAT ATCCTGAACC CCAATTTCAC TCACATCGGC
GTTGGGCATG TGGTCGGCGG GAGCTACGGC AACTACTGGA CGCAGATGTT TATCGGCAGA
TAG
 
Protein sequence
MQSVNKKLAV AVVALMLSVA LLIPATLAHA NAPSAEESKL ITGINQARQK AGVQLLTNSA 
RLNEVALTLL TNGTSVSLAL REQGITYRSA CTLRVGSGNA DLVVRALTGY SSSQVLQPQY
NQIGVAIRNN TTVIVLINGV IAAQPAPQTA PTPAPQPAPS PAPMPSPGPS GLMTAYEMKI
VELVNAERAK LGLRALAVDA KLSQVARLKS EDMRDKRYFA HQSPTYGSPF DMMRQFGITY
RTAGENIAAG QRTPEEAMRG WMNSSGHRAN ILNPNFTHIG VGHVVGGSYG NYWTQMFIGR