| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0045 |
|---|
| Symbol | |
|---|
| ID | 6027269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 51389 |
|---|
| End bp | 52288 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641592899 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001716246 |
|---|
| Protein GI | 169830264 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTGA ACAGGAACTG GCCGCTGACA AACACCGGTG AGGTACGCCG TCTACTGGCG
GAATACGGCT TGAAACCCCG GAAATCCCTG GGGCAAAACT TCCTGGTTGC TGCCGGGGTG
CTGGACAAGA TCCTGGAGGC GGCCGAGGTC GAGAAAGACG AGGTCGTTAT CGAAATCGGA
CCCGGCGTGG GTGCGCTCAC CCGGCGTCTG GCGGAAAAGG GGGCGCGGGT GGCGGCGGTC
GAAATAGACG GTCGCCTGAT TCCACTGTTG AAAGAGGTAC TGGGCGACCT GGGGGACCGG
GTCCGCCTGA TTAACGCCGA TGCCCTCAAG GTGGACTACG GGGCCCTGCT TGCCGAAATG
GGGGCCGGCA GTTTCAAGGT CGTGGCCAAC CTGCCCTACT ACATCACCAG TCCGTTCGTG
GCCGGCTTCC TGGAGGCCGG TTACCGTTTC GAGCGGATGG TACTCATGGT CCAGAAGGAA
GTGGCCGATA GGATGACGGC CGCAAACGGA ACCGAATCTT ACGGGGCGCT TTCCGTTCTG
GTGGCCTACC ATACGGAAGC CGATGTCGTC TGGCGGGTTT CCCGGCACTG CTTCTACCCC
CCGCCCGCGG TAGATTCGGC CGTGGTCCGC CTGATGCGGC GCCCCGCGCC CGCGGTGACA
GTGCTCCAAC CCGAACTCTT TTTCCGGATC GTGCGTGCCT CCTTCGGCCG GCGGCGCAAG
ATGCTGCCCA ACGCGCTGGC GGGAGCCGTT CCGGGTCTGG ACCGTGAGAC CTGGGTCCAA
ATTATTGAAA GCGCCGGCAT TGATCCCCGC GTCCGGGGGG AAACCCTGAC TCCAGATCAG
TTCGGGCTGA TCGCGGACGC CTGCGTGCGG TTAGGTTACG GAGCTCCTTC TGTGTTATAA
|
|---|
| Protein sequence | MDVNRNWPLT NTGEVRRLLA EYGLKPRKSL GQNFLVAAGV LDKILEAAEV EKDEVVIEIG
PGVGALTRRL AEKGARVAAV EIDGRLIPLL KEVLGDLGDR VRLINADALK VDYGALLAEM
GAGSFKVVAN LPYYITSPFV AGFLEAGYRF ERMVLMVQKE VADRMTAANG TESYGALSVL
VAYHTEADVV WRVSRHCFYP PPAVDSAVVR LMRRPAPAVT VLQPELFFRI VRASFGRRRK
MLPNALAGAV PGLDRETWVQ IIESAGIDPR VRGETLTPDQ FGLIADACVR LGYGAPSVL
|
|---|
| |