Gene Daud_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0035 
Symbol 
ID6027557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp41822 
End bp43309 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content70% 
IMG OID641592889 
ProductOrn/Lys/Arg decarboxylase, major region 
Protein accessionYP_001716236 
Protein GI169830254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.730375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTAG GCAAAGGGGG GACTTTCGCG GTGAACCAGC GCCGGGCACC CCTGTTTGAA 
GCCCTGAAGC ACCACGTGAC CAGGAACTAC ACGGGCTTCC ACTTTCCGGG ACACGGCGGG
GGCGCCGGTC TGCCCCGGGT TTTCCCCGCC GGCCGTGAAC TCTTCCGGTT TGATTTGACT
GAACTGCCCG GACTGGACGA CCTGCACGCG CCCGCGGGCC CGATCGCCCG GGCCCAGGAG
TTGGCGGCGG CTTTATACGG CGCCGACCGC ACTTTTTTCC TGGTGAACGG GAGCACGGCG
GGGGTGCAGG CCCTCCTGCT GGCGGCTACG GCCCCCGGGG AAAAGGTGCT CCTGCCCCGG
AACGCGCACC GCGCGGTGAT CGGAGGCCTG GTGCTCTCGG GGGCCGATCC GGTATACGTC
ACGCCCCCCT TCGACGCCGA ATGGGGCTTT TTCCGGCCCC CGCGACCGGC AGACGTCCGG
GCCGCCCTGC AGGCGCATCC CGACCTCCGG GCCGTACTCC TGACCCACCC GGACTACTAC
GGTCAGGCCG TGGTGGATGC CGAAATGGCC GAAGTGCTGC GGGAGACCGG AGCTATTTTC
CTGGCCGACG AGGCTCACGG GGCGCACCTG CCGTTCCACG CCGCCATGCC GGTGCCGGCT
TTGAGGCTCG GTGCGGCGGC CGCGGCGCAG AGCTTGCACA AACTGGGCGG GGCCCTGACC
CAGGCTTCTC TGCTGCATCT GAAAGGGACA GGCCTCTCCC CCGCGCGGGT GAGCCGGGCG
CTGGCGCTGC TCCAGACCTC CAGCCCCTCA TACCTGCTGA TGGCCTCCCT GGATCTGGCC
CGGCGCCAAC TGGCCGTCTC CGGAGGGCGG CGGTTCGGGC GGGCGGTGGA CCTTGCCGGC
CGCCTGCGCC TGGGGCTCGC GGCGCTGGAT GGGGTGGAAG TTTTTGACGC CGGACCGGGC
CGGGCCGACC CGACCAAGGT GATGGTGTCC ACCCGCGGCC TGGGTTTGAG CGGGCACCGA
GCCGCCGCCG TGCTGCGGGA CAAACACTCG GTCCAGGTGG AGGCGGCCGG TTTCGGGCAC
CTCTTGTTCG TGGTCGGGCT CGGGACGCGG GCCCCGGATA TTGCCCGGAC CCTGGGGGCT
TTCCGGGCCC TGGCCCGGGA GCACGCCCCT TCCGACCTCC GCCGTCAGAC CTCCGGCCGC
CGACCTCCGG CCTCCGACTT CCATTTATGG CCGGCACCCC CGGCCCCGAA GGTGCTCACC
CCGCGGGAGA GCTGGTTTGC GCCCGCCCGG GCCGTGCCGG TCCGGGAAGC GTCCGGGCTG
GTGGCCGCCG AAACGGTCAG CCTGTGCCCA CCGGGAATCC CGATCGTGTT TCCGGGTGAA
AGACTCACCC CGGAGGTGTT AGAATATACT TTGGAGATTC GGGCCGGGGG AGTGGCGTTT
CAGGCCGCCG ACCCGGGCTT GAAAACCATC ATGGTGCACG ACGGGTGA
 
Protein sequence
MSVGKGGTFA VNQRRAPLFE ALKHHVTRNY TGFHFPGHGG GAGLPRVFPA GRELFRFDLT 
ELPGLDDLHA PAGPIARAQE LAAALYGADR TFFLVNGSTA GVQALLLAAT APGEKVLLPR
NAHRAVIGGL VLSGADPVYV TPPFDAEWGF FRPPRPADVR AALQAHPDLR AVLLTHPDYY
GQAVVDAEMA EVLRETGAIF LADEAHGAHL PFHAAMPVPA LRLGAAAAAQ SLHKLGGALT
QASLLHLKGT GLSPARVSRA LALLQTSSPS YLLMASLDLA RRQLAVSGGR RFGRAVDLAG
RLRLGLAALD GVEVFDAGPG RADPTKVMVS TRGLGLSGHR AAAVLRDKHS VQVEAAGFGH
LLFVVGLGTR APDIARTLGA FRALAREHAP SDLRRQTSGR RPPASDFHLW PAPPAPKVLT
PRESWFAPAR AVPVREASGL VAAETVSLCP PGIPIVFPGE RLTPEVLEYT LEIRAGGVAF
QAADPGLKTI MVHDG