| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0020 |
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| Symbol | |
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| ID | 6025578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 24564 |
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| End bp | 25625 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641592873 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001716221 |
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| Protein GI | 169830239 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAGA TGGTGGTTCA ATTGAAAAAA ACTGATTGGT ACGACCGCTT TTTTAGTCAG
CGCAAAATAC TGGTCACCGG TGGCACGGGT TCCATCGGAT CGGAACTGGT AAAAAGCCTG
TTGCATCATG GCGTTACCCG AGTGGTAGTC CTGAGTAAAG ACGACAGCAA GCAGTACATG
ATGAAACAGA GGCTGATCTC CAAGGAAAAC ATTTCCTTTA TCCTGGGAGA TGTTAGGGAA
TACGAAACTT TGAAGGAAGC GACCAGGGGT ATGGACCTGG TTTTTCATAC AGCCGCCTTG
AAGCAAATCG GCATCTGTGA AGATAATCCC AAGGAAGCGA TACTGACCAA TACCATGGGC
ACTGTCAATA TTATTAGAGC GTGCCTGGAG AACAGGGTTC AGAAACTGAT TAATATCAGT
ACCGATAAGG CAGTACATCC CACCAGTATC ATGGGCGCCA CCAAGTTCTT ATCGGAGAAG
CTGATCCAGG AGGCCTCCCG CAGGCCGGAC GTGCAAACCA GATTCTGCTC GATACGCTTC
GGCAATGTCC TTAACTCCAG GGGTTCGGTT ATCCCCTTGT GGCTTGAACA GTACCGCTCT
GGTCAACCGC TGCAAGTTAC TGATTTGGCC ATGACCCGTT TTGCCATGAC CATCCCACAG
GCGGTTGAGT TAATCAAAGA ATCTGCTTTC CTTTGTCAGG GAGGAGAGAC ATTTATCTTT
AAAATGAAAA GCGTGCGCTT GGGTGACTTG GTGCAAGCCA TGAAAGCCGT GCTTTCAGAT
TGCAACATGA ACGGAGCCCA GTTCGTGCTA ACCGGACCGC GGCCGGGAGA AAAGAGCTTT
GAACAATTGC TTTTTGCAGA CGAAGCAAAA CGCTTGTTTG AAAATGAACA GCTATACGTG
GTTTTGCCCC ATCAGAGCAG CAGTACCCCC CAGGCCCGCT TTAAACGGGC ACGTCACAAT
GAGTACCGCT CTGATTTGGC TCAAAAATGG AGCGTACCTG AATTAGTGGC CTTACTCCGT
CCGGTAATAA AACAGTCCCT GGGAGATGAA ACAAATGGAT GA
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| Protein sequence | MQKMVVQLKK TDWYDRFFSQ RKILVTGGTG SIGSELVKSL LHHGVTRVVV LSKDDSKQYM
MKQRLISKEN ISFILGDVRE YETLKEATRG MDLVFHTAAL KQIGICEDNP KEAILTNTMG
TVNIIRACLE NRVQKLINIS TDKAVHPTSI MGATKFLSEK LIQEASRRPD VQTRFCSIRF
GNVLNSRGSV IPLWLEQYRS GQPLQVTDLA MTRFAMTIPQ AVELIKESAF LCQGGETFIF
KMKSVRLGDL VQAMKAVLSD CNMNGAQFVL TGPRPGEKSF EQLLFADEAK RLFENEQLYV
VLPHQSSSTP QARFKRARHN EYRSDLAQKW SVPELVALLR PVIKQSLGDE TNG
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