Gene Daud_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0018 
Symbol 
ID6026395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp22313 
End bp23461 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content51% 
IMG OID641592871 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001716219 
Protein GI169830237 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAC TGTGCTTTAC TGGAACCAGG GCGGATTACG GCATTTATCG TCCTCTCCTG 
CAGGCGTTGA ACCGGGAAGA GGATATCAAT CTGCGACTGG TGGTAACGGG AATGCACCTG 
GTGGAAGAAT ACGGCCGCAC CATAACCGCA GTGCAAAAAG ATGGGTTGGA AATAGTTGCT 
GCCCCCTCGA TTCTTGTCCG GGGTGATGCT ACGTGCCAAA TGTCACAGTC CGTAGGCCTG 
GCAGTGCTAT ATTTTGCGGA GATATTATCA TCCCATTGTC CCGAATTTGT CCTGCTGCTG 
GGGGATCGCG GTGAAATGCT GGCCGCCGCC GTAGCGGCTC ATTACCAGAA CATCGGAATT 
GTCCACCTGT ATGGGGGAGA ATGCAGCGGC TCCGCCGATG ACACGGTACG GCACGCCATA 
TCCAAGCTGG CCCATCTTCA CTTTGTCTCC ACGCGGCGTT CCAAAGCCAA CCTGATAAGC 
ATGGGCGAAG AAGCTTGGAG AATCGTCCCC GTGGGCACTT TGCGGAAACA CGATATTAAA 
AGAGCAGGCA ACCTTCACCC GGAACTTGCA AAGGCCTGGT CAGAAAAATA TCACCTCAAC 
AGCGGAACAA AAAACATCCT GGTATGCATG CATCCTGACA CCAAGGAAGA ACTGGAACTC 
TCCAAGCAGA TCGATTCAGT AGTGGATGCC CTTGATGGGA TTAATGAAGC CAATATTATT 
ATCATCGGAC CAAACAGCGA TGCCGGGTCT GATTTGTTTA GAGATAAGTT GGTTAACTTC 
TCCAACAAGA GGGGTAATTG CACCTTCTTG GCCTCCGTAG ACTCCGATGA ATATCTTTTT 
CTACTATCCC GCGTAGACCT ACTAGTGGGT AATAGCAGTA GTGGGATCAT CGAAGCTCCC 
TTTTTCAACC TGCCTTTTAT CAACGTGGGC CGCCGGCAGC AGGGGCGTGA ATGTGGATCC 
AACGTGTTAA GTCTGCCTTA CCATAGCCGA CTCATCCGGG AAGCCATAGT GAAACTGCTG 
CAAAGTGCCA AGGGGGAAGT AACCTGGAAC CCTTACGATC TATTGGATGA ACCGGCCCGA 
TTGATAGTTC AAAGATTAAG AGAAATGGCC AATGCCAAAA AAGTGTGGCA CAAGAGCACC 
GTCTTTTGA
 
Protein sequence
MRILCFTGTR ADYGIYRPLL QALNREEDIN LRLVVTGMHL VEEYGRTITA VQKDGLEIVA 
APSILVRGDA TCQMSQSVGL AVLYFAEILS SHCPEFVLLL GDRGEMLAAA VAAHYQNIGI 
VHLYGGECSG SADDTVRHAI SKLAHLHFVS TRRSKANLIS MGEEAWRIVP VGTLRKHDIK 
RAGNLHPELA KAWSEKYHLN SGTKNILVCM HPDTKEELEL SKQIDSVVDA LDGINEANII 
IIGPNSDAGS DLFRDKLVNF SNKRGNCTFL ASVDSDEYLF LLSRVDLLVG NSSSGIIEAP 
FFNLPFINVG RRQQGRECGS NVLSLPYHSR LIREAIVKLL QSAKGEVTWN PYDLLDEPAR 
LIVQRLREMA NAKKVWHKST VF