Gene Caul_5023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5023 
SymboltrmE 
ID5902485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5425506 
End bp5426849 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID641565544 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001686641 
Protein GI167648978 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0584026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGATTTACGC GCCCGCCACG GGCGCGGGCG CGGCGGCGGT GGCGGTGGTG 
CGGATCTCCG GAGCGCGCTC CGCCGACATC GTGCGCGGTC TGGCGGGTGA TCTGCCCAAG
CCGCGTCGAG CGGTCCTGCG CCAGCTGACA CGGGATGGCG TCGCCTTGGA CGACGCCTTG
GTGCTCTGGT TCCAGGGTCC GGCCAGCTAC ACCGGCGAAG ACGCGGCGGA GTTCCACGTG
CACGGCGGTC GGGCGGTGGT CGAGGCCGTG CTGGAAGCGC TGGCCGCCGA GGGTTTGCGC
TTGGCCGAGC CTGGCGAGTT CACGCGGCGC GCCTTCGAAA ATGGCAAGCT CGACCTGACC
CAGGCCGAGG GGGTCGCCGA TTTGATCGAC GCCGAAACCG AAGCCCAGCG GCGCCAGGCT
CTGGGCCAGT TGGGCGGCGC GTTGAGCCAA CGCTACGAGG CTTGGCGCGG CCTGTTGGTC
CAGGCCTTGG CCATGCTGGA AGCGGCCGTG GACTTTCCCG ACGAGGAACT GCCCGAGGAC
GTCGCGGCGC GCGCGCGGCC GGGCCTGGAG GCCCTGGAGG CTGAGATCGG CGCGGCCCTG
GTCGACGCGT CGCGGGGGCG ACGGGTGCGG GACGGATATC GCATCGCCCT CGTCGGCGCG
CCTAACGCCG GCAAGAGCAC CTTGCTCAAT GCTTTGGTAG AGCGAGACGC GGCGATCGTC
ACCTCCACAC CCGGCACCAC GCGAGACATC ATCGAGGTCC CCCTGACTCT CGGAGGGTAT
AAGACCTTGC TCGCCGACAC CGCTGGCTTG CGGAAGACCG AGGACACCAT TGAGGCCGAG
GGTGTGCGCC GGGCGCGGGC CTGGGCGGCG GGCGCGGATC TGCGCCTCTG GGTGATCGAC
GCGGCGATGT TCCACGTGAA ACAGGACGAC GAGTTGGCGG TCATTCAGCG GGGCGACTGG
GCGGTGATCA ACAAGATCGA CCTGGTTGAC GCCGGCCGGC TGGCGGAGCT CAGAGCGACG
TTTTCCGAAC AGGGCCTCAA GGTCGTCGAA CTCGCCGCGC GGAAGCCGGG CGGCGCGGAA
CCGGCGAGGG CGGCCCTCTC GACCCACGTG ATTGACGCCT TGTCAGGCGC CGAGTTCCCA
GCTGCGACGC GAATACGGCA CGCGGAAAGT CTAACCGAGG CGCGGACCTA TCTGCAGCGC
GCTCTCTCTG ATGTGGGCCT GGAGGTCGAG CTAGTCGCCG AGGACGTTCG GTTGGCTGCG
CGGGCTCTTT CGCGGATCAC GGGGCGGATT GATCCTGAGG ACGTGCTGGA CCGCGTGTTT
TCAAGCTTCT GCATCGGCAA GTGA
 
Protein sequence
MNDTIYAPAT GAGAAAVAVV RISGARSADI VRGLAGDLPK PRRAVLRQLT RDGVALDDAL 
VLWFQGPASY TGEDAAEFHV HGGRAVVEAV LEALAAEGLR LAEPGEFTRR AFENGKLDLT
QAEGVADLID AETEAQRRQA LGQLGGALSQ RYEAWRGLLV QALAMLEAAV DFPDEELPED
VAARARPGLE ALEAEIGAAL VDASRGRRVR DGYRIALVGA PNAGKSTLLN ALVERDAAIV
TSTPGTTRDI IEVPLTLGGY KTLLADTAGL RKTEDTIEAE GVRRARAWAA GADLRLWVID
AAMFHVKQDD ELAVIQRGDW AVINKIDLVD AGRLAELRAT FSEQGLKVVE LAARKPGGAE
PARAALSTHV IDALSGAEFP AATRIRHAES LTEARTYLQR ALSDVGLEVE LVAEDVRLAA
RALSRITGRI DPEDVLDRVF SSFCIGK