Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5023 |
Symbol | trmE |
ID | 5902485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5425506 |
End bp | 5426849 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641565544 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001686641 |
Protein GI | 167648978 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0584026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CGATTTACGC GCCCGCCACG GGCGCGGGCG CGGCGGCGGT GGCGGTGGTG CGGATCTCCG GAGCGCGCTC CGCCGACATC GTGCGCGGTC TGGCGGGTGA TCTGCCCAAG CCGCGTCGAG CGGTCCTGCG CCAGCTGACA CGGGATGGCG TCGCCTTGGA CGACGCCTTG GTGCTCTGGT TCCAGGGTCC GGCCAGCTAC ACCGGCGAAG ACGCGGCGGA GTTCCACGTG CACGGCGGTC GGGCGGTGGT CGAGGCCGTG CTGGAAGCGC TGGCCGCCGA GGGTTTGCGC TTGGCCGAGC CTGGCGAGTT CACGCGGCGC GCCTTCGAAA ATGGCAAGCT CGACCTGACC CAGGCCGAGG GGGTCGCCGA TTTGATCGAC GCCGAAACCG AAGCCCAGCG GCGCCAGGCT CTGGGCCAGT TGGGCGGCGC GTTGAGCCAA CGCTACGAGG CTTGGCGCGG CCTGTTGGTC CAGGCCTTGG CCATGCTGGA AGCGGCCGTG GACTTTCCCG ACGAGGAACT GCCCGAGGAC GTCGCGGCGC GCGCGCGGCC GGGCCTGGAG GCCCTGGAGG CTGAGATCGG CGCGGCCCTG GTCGACGCGT CGCGGGGGCG ACGGGTGCGG GACGGATATC GCATCGCCCT CGTCGGCGCG CCTAACGCCG GCAAGAGCAC CTTGCTCAAT GCTTTGGTAG AGCGAGACGC GGCGATCGTC ACCTCCACAC CCGGCACCAC GCGAGACATC ATCGAGGTCC CCCTGACTCT CGGAGGGTAT AAGACCTTGC TCGCCGACAC CGCTGGCTTG CGGAAGACCG AGGACACCAT TGAGGCCGAG GGTGTGCGCC GGGCGCGGGC CTGGGCGGCG GGCGCGGATC TGCGCCTCTG GGTGATCGAC GCGGCGATGT TCCACGTGAA ACAGGACGAC GAGTTGGCGG TCATTCAGCG GGGCGACTGG GCGGTGATCA ACAAGATCGA CCTGGTTGAC GCCGGCCGGC TGGCGGAGCT CAGAGCGACG TTTTCCGAAC AGGGCCTCAA GGTCGTCGAA CTCGCCGCGC GGAAGCCGGG CGGCGCGGAA CCGGCGAGGG CGGCCCTCTC GACCCACGTG ATTGACGCCT TGTCAGGCGC CGAGTTCCCA GCTGCGACGC GAATACGGCA CGCGGAAAGT CTAACCGAGG CGCGGACCTA TCTGCAGCGC GCTCTCTCTG ATGTGGGCCT GGAGGTCGAG CTAGTCGCCG AGGACGTTCG GTTGGCTGCG CGGGCTCTTT CGCGGATCAC GGGGCGGATT GATCCTGAGG ACGTGCTGGA CCGCGTGTTT TCAAGCTTCT GCATCGGCAA GTGA
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Protein sequence | MNDTIYAPAT GAGAAAVAVV RISGARSADI VRGLAGDLPK PRRAVLRQLT RDGVALDDAL VLWFQGPASY TGEDAAEFHV HGGRAVVEAV LEALAAEGLR LAEPGEFTRR AFENGKLDLT QAEGVADLID AETEAQRRQA LGQLGGALSQ RYEAWRGLLV QALAMLEAAV DFPDEELPED VAARARPGLE ALEAEIGAAL VDASRGRRVR DGYRIALVGA PNAGKSTLLN ALVERDAAIV TSTPGTTRDI IEVPLTLGGY KTLLADTAGL RKTEDTIEAE GVRRARAWAA GADLRLWVID AAMFHVKQDD ELAVIQRGDW AVINKIDLVD AGRLAELRAT FSEQGLKVVE LAARKPGGAE PARAALSTHV IDALSGAEFP AATRIRHAES LTEARTYLQR ALSDVGLEVE LVAEDVRLAA RALSRITGRI DPEDVLDRVF SSFCIGK
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