Gene Caul_4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4954 
Symbol 
ID5902564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5357808 
End bp5358425 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID641565475 
Product3'-5' exonuclease 
Protein accessionYP_001686572 
Protein GI167648909 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.332898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAACT TCCTGCATGA AGGCGACCTG CCCGACGGCG TTTTCGCCGG CGCCGCCGCC 
ATCGCCATCG ATTCCGAGAC CATGGGCCTG CGCCTGGGCC GCGACCCGCT GTGCGTCGTC
CAGCTGTCGT CCGGCGACGG CGACGCCCAT GTGGTGCGCC TGGACCGCGC GACCTACGAC
GCCCCCAACC TCAAGCGCCT GCTGACCGAT CCGTCGGTGG TCAAGCTGTT CCACTTCGGC
CGCTTCGATA TCGCCATGTT CCTGTTGCAC CTGGGTGTCA TGACAGCGCC TGTGTACTGC
ACCAAGATCG CCTCCAAGCT GGCCCGCACC TATACCGATC GCCACGGCCT GAAGGACGTG
ACGCGCGAAC TGGTCGGCGT CGAGCTGTCG AAGGTCCAGC AGAGTTCGGA CTGGGGCGCG
GCGACCCTGT CGCCGGAGCA ACTGGCCTAT GCCGCCTCCG ACGTGCTGCA CCTGCACGCC
CTGCGCGAGC GCCTGAACGC CATGCTGGTC CGCGAAGGCC GCATGCAATT GGCCCAGGCC
GCGTTCGACT ATCTTCCCCA CCGCGCCGCC CTCGACCTGG CCGGCTGGGA AGACGTCGAC
ATCTTCGCCC ACACCTGA
 
Protein sequence
MANFLHEGDL PDGVFAGAAA IAIDSETMGL RLGRDPLCVV QLSSGDGDAH VVRLDRATYD 
APNLKRLLTD PSVVKLFHFG RFDIAMFLLH LGVMTAPVYC TKIASKLART YTDRHGLKDV
TRELVGVELS KVQQSSDWGA ATLSPEQLAY AASDVLHLHA LRERLNAMLV REGRMQLAQA
AFDYLPHRAA LDLAGWEDVD IFAHT