Gene Caul_4896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4896 
Symbol 
ID5902358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5289581 
End bp5290588 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID641565416 
Productputative mRNA 3-end processing factor 
Protein accessionYP_001686514 
Protein GI167648851 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC AAGACCTGAT CTGTCCGAGA CCCGATGGGC TCTACTGCCC GCCCGGGGAC 
TTCTATATCG ACCCGGTCCG CCCCGTGGAC CGGGCGGTGA TCACCCATGG CCATGCCGAT
CACGCCCGAG CCGGGCACGG CGTGGTGGCC GCCACGCCCG AGACCCTGGC GATCATGGCC
GAGCGCTATG GCGAGGGCTT CGCCGGACGT CGCGAGCCGA TCACCTACGG CCAGGGCTTC
ACCCACAATG GCGTCGAGGT CGGGCTGGTC CCGGCCGGCC ACGTGCTGGG CTCTGCCCAG
GTCGTGGTGC GCTGGAAGGG CATGACCATC GTCATTTCCG GCGACTACAA GCGCCGCCGC
GATCCCACCT GCCCGGCCTT CGAGCCCGTG CCCTGCGATG TGTTCGTGAC CGAGGCGACC
TTCGGCCTGC CGGTGTTCCG TCACCCCGAC GACGCCGGCG AGATCGCCGC CCTGCTGAAG
TCGATCGAGC AGTTTCCCGA GCGCTCGCAC ATCGTCGGAG CCTACGCGCT CGGCAAGGCC
CAGCGGGTGA TCAAGCTGTT GCGCGAGGCG GGCTGGGACC AGACGATCCA TGTGCACGGG
GCGATGGAGC GGCTGAACCG GCTCTACGAA CGCCACGGCG TCGACCTTGG CCCGCTGGCC
CCGGCCACGA CCGGCGCGAA GAAGGATTTC GAGGGCGCGA TCATCGTCGC GCCGCCCTCG
GCCCTGGCCG ACCGCTGGTC GCGGCGCTTT CCCGATCCGG TCGACTGCTT CGCCAGCGGC
TGGATGCGAG TGCGGGCGCG AGCCCGCCAG CGCGGCGTCG AGCTGCCGCT GATCATTTCC
GACCATGCCG ACTGGGACGA ATTGACCGCC ACCTTGGGCG AGCTTCGCCC CGGCGAGGTG
TGGATCACCC ACGGCCGCGA GGAGGCCCTG GAGCGCTGGT GCGAACTGGA GGGCATCCCG
GCCCGGGCGC TGCGATTGGT GGGCTATGAC GAGGAGGAGG GAGATTAA
 
Protein sequence
MKPQDLICPR PDGLYCPPGD FYIDPVRPVD RAVITHGHAD HARAGHGVVA ATPETLAIMA 
ERYGEGFAGR REPITYGQGF THNGVEVGLV PAGHVLGSAQ VVVRWKGMTI VISGDYKRRR
DPTCPAFEPV PCDVFVTEAT FGLPVFRHPD DAGEIAALLK SIEQFPERSH IVGAYALGKA
QRVIKLLREA GWDQTIHVHG AMERLNRLYE RHGVDLGPLA PATTGAKKDF EGAIIVAPPS
ALADRWSRRF PDPVDCFASG WMRVRARARQ RGVELPLIIS DHADWDELTA TLGELRPGEV
WITHGREEAL ERWCELEGIP ARALRLVGYD EEEGD