| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4868 |
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| Symbol | dapF |
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| ID | 5902330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 5263667 |
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| End bp | 5264536 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641565388 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001686486 |
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| Protein GI | 167648823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA CCTTTCTCAA GATGAATGGC CTCGGGAACG ATTTCGTCGT GATCGAGACC
CTGACCCAGC CCTTCCATCC GACGGCTGAG GAGATCCGCG CCATCGCCAA ACGCCCGAAC
GCCAAAGAGG GCGAAGGCGG GATCGGCTGC GACCAGGTGA TCGCCATCGA TCCGCCGCGC
GCCGAGGGCG CTTCGGCCTA TGTGCGGTTC TGGAATTCGG ACGGCGAGGA GACCGGGGCC
TGTGGCAACG GCACGCGCTG CGTCGCTTGG CTGCTGATGC AGTCGGGCCA GAAGGACAGC
GTGGCCTTCG ACACCGTGGC CGGCCGCCTG TCGGGCAAGA TGGCCGGCGA CAAGCTGGTG
ACGGTCGATA TGGGCCAGCC GGGCCTGGCC TGGAACCAGA TCCCGCTGGC CGAGGAGATG
GACACCGTCG GGATCGAGCT GCAGGTGGGT CCGATCGACG CGCCGCTGGT CCACACTCCG
GGCTGCGTCT CGATGGGCAA TCCGCACGTG GTGTTCTTCG TCGACGCTCC GGTCAGCGAC
GCCTTCGCGC GCGGCACGGG CAGCTTGGTC GAGCATCACC CGCTGTTCCC GGAAGGCGTC
AATGTCGGCT TCGCCCACAT CGCGGCGCGT GACCACATCA AGCTGAAGGT CTGGGAGCGC
GGCGCGGGCC TAACCGCCGC CTGCGGCACC GGCGCCTGCG CGGCCCAGGT GGCCGCCGTG
CGTCGCGGCC TGACCGACCG CGTCGCCAAG GTCGAATTCG AAAGCGGCGC CCTGACCATC
GAGTGGCGCG AGGCCGACGG CCACGTGATC ATGACCGGTC CGGTGACGAT GGAGTTCGTC
GGCAAGCTGC CGGAGAAGGT CGCGGCATGA
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| Protein sequence | MSRTFLKMNG LGNDFVVIET LTQPFHPTAE EIRAIAKRPN AKEGEGGIGC DQVIAIDPPR
AEGASAYVRF WNSDGEETGA CGNGTRCVAW LLMQSGQKDS VAFDTVAGRL SGKMAGDKLV
TVDMGQPGLA WNQIPLAEEM DTVGIELQVG PIDAPLVHTP GCVSMGNPHV VFFVDAPVSD
AFARGTGSLV EHHPLFPEGV NVGFAHIAAR DHIKLKVWER GAGLTAACGT GACAAQVAAV
RRGLTDRVAK VEFESGALTI EWREADGHVI MTGPVTMEFV GKLPEKVAA
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