Gene Caul_4834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4834 
Symbol 
ID5902296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5231050 
End bp5233362 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content73% 
IMG OID641565354 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001686452 
Protein GI167648789 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC CTGATCTGAT CCTGGCCGCG ACGGCCGGCG CGGTCTGCCT CGCCCTCTGC 
GCCACCCTGT GGGCCATGGC CCAGCGACGG CGGTTCGAAA GCCAGGTCGC CCAGCTGCGG
ACCCGCAACG ACACGCTCGA GGACCGGCTG ATGGACAGCC AGGGCGCGGC CGAGGCCTTC
GAGACGGCGG TGATCGCCAT CCACGAGCAC GGCGCGAACC TGATCTCCGG CGAGGATGTC
CTGGCCGACT GCGCCAGGAT TCTCGACGCT CCCGCCCAGG CCGAGGCCGT GGTCGCGGCC
CTGGTGCGGG CCGATCCTGA CCACGCCCAC AAGCTGACCG CCCTGTTCGA GCGCGGCGAG
GCCTGCGCCT TCGAGGCGCG CGGCCCGCGC GGCGGGGTGA CGGTCGAGGG CCGCGCGGCG
GGGACCCGGG CCTGGCTGCG CCTGGCCGCC GCGGCCGCCG ACGAGACCGG CTTGCCGGGC
GCGGCCCGCT TCGCCGCCTT CATGGACGGC CTGATCGAGC CGGCCTGGAT GTCGGGCGCG
GACGGCGTTC CGGCCTGGGG AAACGCGGCC TATCTGCGGG TGGTCGGCGC CGACTCGGCC
GGCGACGCGG CGCGCGAGGG CAAGTCGATC GACCGTGCCG CCGACGCGCT GGCTGTCGAG
GCCGCCAAGG CCGGCGAGCT GCGCGAGGTG GTCCGCTGGG TGCCGATCGA CGGCCGCCGG
CGCGCCCTGC GCTTCTCGGC CCAGCCGCTG GAAGGCGGCG GGGTGGGGGT GTTCAGCAGC
GACGTCACCG AGGTCGAGGA CATGCGCGAC GCGCTGAAGC GGCACGTCGA GGCCCATGAC
GAGACGCTCA ACCACATCGC CGACGCGGTG GCGATCTTCA GCCAGAGCCG TCGCCTGGCC
TTCCACAACA CCGCCTTCGC CAACCTGTGG GGGCTGGAGC CGGCCTGGCT GGCCGATCGG
CCGACCCACG GCGAGGTGCT GGACCGCCTG CGCCAGCGTC GCAGGCTCCC CGAGACGGTG
GACTACGCCA AGTGGAAGGC CGCCGAGCTG GCGCGCTACG AGGACCTGGG TCCTCAGGCC
GACGAGATGT GGGACCTGCC CGACGGCCGC ACCCTGCGGG TCGTGCGCCA GCCCCACCCG
CTGGGCGGCA TGCTGCTGCT CTATTCCGAC ATCACCGGCG AGCTGCGCCT GAAGGCCCAG
TACAACGCCC TGATCCAGGT GCAGCAGGCC ACGCTGGACA AGCTGAACGA CGCTGTCGCC
GTGTTCGGCT CGGACGGCCG CCTGCGCCTG CACAACGAGG CCTTCGAGAC CTTCTGGAAC
GTCTCGGCCC AGGCGCTTGA GGCCGCGGTC GATTTCGAGG GCGTGGTCGA GCTGTGCGTG
CCGCGGCTGC ACGACCTGAG CTTCTGGCGC GAGCTGAAGG GCCGGGTGGC CGACCCCGAT
CCGCAGATGC GCGCGCCCAC GTCCGGCGAG ACCCGCACCT CGGACAACCG CATCATCGTC
TATCAGAGCC GGCCCCTGCC CGACGGTGCG ACCCTGATCG CCTTCGCCGA CGTCACCGAC
ACCCGCGACC TGCAGGCGGC CCTGGCCGAC CGCTCCCAGG CCCTGACCGA GGCCGAGCGG
CTGAAGCGCG ACTTCGTCGG TAACGTCTCC TACGAGCTGC GCACCCCGCT GACCACGATC
ATCGGCTATT CGGAACTGCT GGAGCGGGCC GACGGCCTGT CGGAGCGCAG CCGGGGACAC
GTGGCCTCGG TGCGCTCGGC GGCCACCCAG CTGGCCCGCT CGATCGACGA CGTGCTGGAC
ATGGCCCAGA TCGACGCGGG CGAAATGGCC CTGGAGATCG GCGACATCCG GGTGGCCGGC
CTGCTCAGCG ACGCCCAGGA ACGCTCGCTG AAGATCGCCC AGATCGGCGG AGTCACCCTG
TCGGTCGAGT GCGACAAGGA CGTCGGCCTG ATCCGCGGCG ACCAGAAGCG GCTATCCCAG
ATCCTCGACC ACCTGATCGA GAACGCCCTG CGCCAGACCC CGCCGGACGG CGTGGTCACC
CTGTCGGCGC GGCGGGCTCT GGGCGAGGTG CGGCTGGACG TCTCCGACAC CGGCCGAGGC
GTGCCCTTCC ACGTCCAGGC CCACATCTTC GACCGCTTCG TCGGCCGCGA CCGCGGCGGG
CCGGGCCTGG GCCTGGCCCT GGTCAAGGCC CTGGTCGAGC TGCATGGCGG CTGGGTGGCG
CTGGAGAGCG AGCCCGGCGC GGGCTCGACC TTCACCTGCC ACCTGCCCGA GACCCAGCAG
CCGGGCGCGG CCCAGCCGGA GTTTGGGTTC TGA
 
Protein sequence
MTSPDLILAA TAGAVCLALC ATLWAMAQRR RFESQVAQLR TRNDTLEDRL MDSQGAAEAF 
ETAVIAIHEH GANLISGEDV LADCARILDA PAQAEAVVAA LVRADPDHAH KLTALFERGE
ACAFEARGPR GGVTVEGRAA GTRAWLRLAA AAADETGLPG AARFAAFMDG LIEPAWMSGA
DGVPAWGNAA YLRVVGADSA GDAAREGKSI DRAADALAVE AAKAGELREV VRWVPIDGRR
RALRFSAQPL EGGGVGVFSS DVTEVEDMRD ALKRHVEAHD ETLNHIADAV AIFSQSRRLA
FHNTAFANLW GLEPAWLADR PTHGEVLDRL RQRRRLPETV DYAKWKAAEL ARYEDLGPQA
DEMWDLPDGR TLRVVRQPHP LGGMLLLYSD ITGELRLKAQ YNALIQVQQA TLDKLNDAVA
VFGSDGRLRL HNEAFETFWN VSAQALEAAV DFEGVVELCV PRLHDLSFWR ELKGRVADPD
PQMRAPTSGE TRTSDNRIIV YQSRPLPDGA TLIAFADVTD TRDLQAALAD RSQALTEAER
LKRDFVGNVS YELRTPLTTI IGYSELLERA DGLSERSRGH VASVRSAATQ LARSIDDVLD
MAQIDAGEMA LEIGDIRVAG LLSDAQERSL KIAQIGGVTL SVECDKDVGL IRGDQKRLSQ
ILDHLIENAL RQTPPDGVVT LSARRALGEV RLDVSDTGRG VPFHVQAHIF DRFVGRDRGG
PGLGLALVKA LVELHGGWVA LESEPGAGST FTCHLPETQQ PGAAQPEFGF