| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4814 |
|---|
| Symbol | |
|---|
| ID | 5902276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5209393 |
|---|
| End bp | 5211168 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641565334 |
|---|
| Product | type I secretion system ATPase |
|---|
| Protein accession | YP_001686432 |
|---|
| Protein GI | 167648769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTG CGAATTCAAC GGCGGGCAAC CCCTTGCGGG CCGCTATAGA GACATGCCGT
CGCCACTTCG TGGCGGTGGC GATCTTCAGC GCCTTGCTGA ATATCCTGTA TCTGGCTCCG
ACCATTTACA TGCTGCAGGT CTATGATCGG GTGGTGCCGA CGCGCGGGGT GATCACCCTA
GTCTTCCTGA CGGTCATCTT CCTGTTCGCC ACCGCCGTGC TGACCGGGCT GGACTCGCTG
CGTTCGCGCC TGCTGGTCCG GGCCAGCAGC CGGCTCGACC GCCGGGTCTC GCCCGCGATC
ACCTCCGCGG TGATTTCGCG GGCTGGCGGC TCCATCAAGT CGACCCAGGC GATGCGCGAG
TTCGACACCC TGCGCCAGAC GATCACCGGC ATCGGGATCC TGGCCCTGTT CGATGCGCCG
TGGACGCCGA TCTACATCCT CATCTGTTTC CTGCTGCACC CGCTGCTCGG CGCCACGGCG
CTGGGCGGTT CGCTGATCCT GCTGGGCCTG GCCTTTCTCA ATGAGCGGTC GACGACCGGC
CCGCTGAAAC GCGCCAATGA AGCGGCCGCC AAGGCCTACA ACTCGCTCGA CCAGTCGGCC
AACATCGGAC CCGTGCTGCG CGCCCTGGGC ATGCGCAAGG CGATGGTGGC GCGCCACATG
CAGGAGCGGC ACGAGTCGAT CCACCTGCAG GCCGAGGCGG CGTTCAGCTC GGTCACCTTC
ATGTCGCTGA CCAAGTTCAC GCGCCTGTCG CTCCAGTCGC TGTCGCTGGG CCTCGGCGCC
TATCTGGCGA TCGAGGGCAA GATCTCGGCC GGTTCGATCT TCGCGGCCTC GCTGCTGATC
ACCCGCGCCT TGGCGCCGAT CGAGCAGGTC CTGGGGGCCT GGCGCAGCGT CGCGCAGGGC
CGCGTCGCCT ATCGCGCGCT GAACGAACTG TTCGACCAGG CCGACCTGGG CGAGGCCCAC
ACCCTGCTGC CCAAGCCCGA AGGCCATCTG GAGCTGGAAA ACGTGTCGGT GCTGTCGCCG
GCCCGCGACC GCCTGATCCT CAATGGCATC ACCTTCTCGC TGAAGGCCGG CGAGACCCTC
GGGGTCGTGG GCGCCAGCGG CGCCGGCAAG TCTACGCTCG CCCGGGCCAT GGCCGGGGCC
CTGCGCCCTG AACAGGGCCG CGTGCGCCTC GACGGGGCTG ACTTGAAGGA CTGGGACGAA
GACCAGGTCG CTCAGTACGT CGGCTACGTG CCGCAGGACC CGAGCCTGCT GATGGGCAGC
ATCAAGGAAA ACATCTCGCG CTTCCAGACG CAGTTGGTCG ACGACCCCGC GACGCTTGAC
GCGGCGGTGG TTCGCGCCGC CCAGGCGTGC GGCGCCCACG ACATGATCGT TCGTCTGCCG
AACGGCTACG ACACGCCTCT GGGCTGGGGA GGAGCGGGCC TGTCGGCCGG CCAGGCCCAG
CGCGTGGCCC TGGCGCGCGG CATGTTCGGC GAGCCCAGCC TGCTGGTGCT CGACGAACCC
AACGCCCACC TCGACGCCGA CGGCGAACAG GAACTGCTCA AGGGCTTGGT GCAACTGAAG
AAGGAAGGGG TCACGGTGGT CATCGTCGCC CACCGGACCA GCGTGCTGGC CACCATCGAC
CAACTGATGG TCCTGCGCGA CGGCCGTATC GAGATGGCCG GCCCTCGCGA CGAGGTGACC
CAGGCCCTGG CCGCGCGCCG TGCGCCGCCA AGCCTGACGC CCAACAGCAA CAATAACAAC
AGCGCCTCGA TCGAATCGAA AGAACCGGCG GAATGA
|
|---|
| Protein sequence | MATANSTAGN PLRAAIETCR RHFVAVAIFS ALLNILYLAP TIYMLQVYDR VVPTRGVITL
VFLTVIFLFA TAVLTGLDSL RSRLLVRASS RLDRRVSPAI TSAVISRAGG SIKSTQAMRE
FDTLRQTITG IGILALFDAP WTPIYILICF LLHPLLGATA LGGSLILLGL AFLNERSTTG
PLKRANEAAA KAYNSLDQSA NIGPVLRALG MRKAMVARHM QERHESIHLQ AEAAFSSVTF
MSLTKFTRLS LQSLSLGLGA YLAIEGKISA GSIFAASLLI TRALAPIEQV LGAWRSVAQG
RVAYRALNEL FDQADLGEAH TLLPKPEGHL ELENVSVLSP ARDRLILNGI TFSLKAGETL
GVVGASGAGK STLARAMAGA LRPEQGRVRL DGADLKDWDE DQVAQYVGYV PQDPSLLMGS
IKENISRFQT QLVDDPATLD AAVVRAAQAC GAHDMIVRLP NGYDTPLGWG GAGLSAGQAQ
RVALARGMFG EPSLLVLDEP NAHLDADGEQ ELLKGLVQLK KEGVTVVIVA HRTSVLATID
QLMVLRDGRI EMAGPRDEVT QALAARRAPP SLTPNSNNNN SASIESKEPA E
|
|---|
| |