| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4781 |
|---|
| Symbol | |
|---|
| ID | 5902243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5162388 |
|---|
| End bp | 5164178 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641565301 |
|---|
| Product | heparinase II/III family protein |
|---|
| Protein accession | YP_001686399 |
|---|
| Protein GI | 167648736 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.997993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG CCCCCGCGAC AGGTTCCGCC CGCAAGCCGA CCGCCCTCGC CGGCGGCCCC
CAAGGGCGTG GCAAGGCCCA TGGTCGCGGC AAGGCGCCCA AGGGGCTGTT TTTCAAGGCC
TTGGGCGCTT CGATACGCGG CAATCTCGAG CGCGAATGGT TCGGTTCGCC GCCGCATCGC
GCCCTGATCA GCCGCCCGCG CCCCGTCGGC CTGGCCGTCC GTCCGCACGA CCCGCGACCG
GTCGACATCG AGCGCGGCCG CCAACTGCTT GACGGCGTCA TGACCCTGGA CGGCGGCGCG
CTGCGTCTGG GCGAGACCGG CGACCCCTTC GACCAGCCCA GCCCGACCCG TCAGTTCGCG
ACCGCCCTGC ACGGCTTCGA CTGGCTGCCG CATCTGTTGG CCGCCGGTCC CGGCGCGCCA
CGTCTGGCCT TGCGGCTGCT ACAGGACTGG CGGCGGGTGT TCGGGGTGTG GAACGCCTTT
TCATGGAGCG GCGAGCGGCT GGAGCGCCGC ACCTTCCACC TGGCCTGCGC CGCCCGCGCC
CTGTCGCCCG AGGCCTCCGA CGCCGAGATC TCGGCCATGA CCATGGACAT CGCCCGGGGC
GCCCGCCAAC TGCTCAAGGC CTCCGACGCC CCCGACCGCC GGCTGGAACG CGCCGTCGTC
GTGGCCATCG CCGGCTGCGC CCTGACCGGC AAGGCCAGCG ACCGGTTGAT GGCCGCGGGG
CTCAAGCGGG TGGCGGCCGA TATCGAGAGC ATCGTCCTGC CCGATGGCGG CCACGCCAGC
CGCTCGCCCG AGGCGGGGCT GGAGCTGTTG TTCGACCTGC TGACCCTCGA CGACGCCCTG
GGCCAGCGCG GCCGCCCGGC GCCCGAGGCC CTGGGCCGGG CCATCGACCG GCTGAGCTCC
TCGGTGCGGT TCTTCACCCT GGCCGACGGT TGCCTGGCGG CCTTCCAGGG CGGCGAGGCC
GTGGAGCCGC GCCGGGTGGC CGCGGCCCTG GCCCACGACG ACCACGGTCC GCGTCCGCCG
CAAAGCGCGC CGCATGTCGG CTATCAGAAG ATGCAGGGCG GCAGCATCCA GGTGATGGCC
GACGCCGGCC CGCCGGCCAG AGGCGTGCTC AGCGTCTCGG CCTGCGCCCA GCCGGCCGCC
GTCGAGATCG TCTGCGGCAA GGATCGGTTG ATCACCAGCT GCGGCTGGAG CCCGGAGGCC
ACCGGCGCCA ACGCCTTCCG GCTGTCGGAC GCCGCTTCGA CCCTGTCGGT CGGCGACGGC
TCTGCCGGAC GACCGCTGTC GGGCTGGCGA TCCGGCGCCC TGGGTCCCTG GCTGATCGAC
GGCGCGACCG ATGTCGAGAT CAAGCGTCAC GACGCCGACG TCGGGGTGTG GCTGGACATC
GTCCACGACG GCTGGCGCCG CCTGGGCCTG ACCCATGCCC GCCGCCTGTA TCTCGACCTC
AAGGCCGATG AGCTGCGCGG CGAGGACAGC CTGATCCCGC TCCCAGACAA AAATGGCGTC
TCGCCCCATG CCGACGGGCC GCGCCGCTAC CTGCCGTTCA TGATCAGCTT CCACCTGCAT
CCGGACGCCC GCGCCTCGCT GGCCCGCGAT GGCAAGAGCG TGCTGATCAA GGGGCCGTCC
AATGTCGGCT GGTGGCTGCG CAACGACGCC GTCGATGTCG CCATCGCCCC CTCGGCCCAT
TTCGACCACG GTCACGCCCG GCGGGCGGGA ACCATCGTGC TCAGGAGCCA GGTGCGTCCC
GAGAAGGGCG CCAAGATCCG CTGGAAGCTG GCCCGGGCGG CGGATCACTG A
|
|---|
| Protein sequence | MDGAPATGSA RKPTALAGGP QGRGKAHGRG KAPKGLFFKA LGASIRGNLE REWFGSPPHR
ALISRPRPVG LAVRPHDPRP VDIERGRQLL DGVMTLDGGA LRLGETGDPF DQPSPTRQFA
TALHGFDWLP HLLAAGPGAP RLALRLLQDW RRVFGVWNAF SWSGERLERR TFHLACAARA
LSPEASDAEI SAMTMDIARG ARQLLKASDA PDRRLERAVV VAIAGCALTG KASDRLMAAG
LKRVAADIES IVLPDGGHAS RSPEAGLELL FDLLTLDDAL GQRGRPAPEA LGRAIDRLSS
SVRFFTLADG CLAAFQGGEA VEPRRVAAAL AHDDHGPRPP QSAPHVGYQK MQGGSIQVMA
DAGPPARGVL SVSACAQPAA VEIVCGKDRL ITSCGWSPEA TGANAFRLSD AASTLSVGDG
SAGRPLSGWR SGALGPWLID GATDVEIKRH DADVGVWLDI VHDGWRRLGL THARRLYLDL
KADELRGEDS LIPLPDKNGV SPHADGPRRY LPFMISFHLH PDARASLARD GKSVLIKGPS
NVGWWLRNDA VDVAIAPSAH FDHGHARRAG TIVLRSQVRP EKGAKIRWKL ARAADH
|
|---|
| |