| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4674 |
|---|
| Symbol | |
|---|
| ID | 5902136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5052132 |
|---|
| End bp | 5054210 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641565193 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001686292 |
|---|
| Protein GI | 167648629 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.396726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT CCTTCCGCCT GGGCCTGATG GCCGGCGCCA CGTTCTGCCT GCTGTCTTCC
GCCGCCCATG GCGCTAACTC GGCCGCTGAC GCCGACCAGC GCGCCATCGT CGATTCGGTC
ATCGTCACCG CCCGCGCCAA TCCCGAGGAC CCGCCGGTCG TGGCGGCCGC TCGCCGCCGC
CTGTCGGAAA CGCCCGGCGG GGTGTCGGTG ATCTCCCAGG AATCCTACAT CGACCGCCAG
ACCCTGGCCC TGGACGACAT GCTGCGCGAC GCGCCGGGCG TCTACGCCCA GCGCAAGTGG
GGCGGGGATA TCCGCATCTC GATCCGCGGC TCGGGGATCG GCAACGCCAA CCACAACCGG
GGCCTGCTGA TCGCCCAGGA CGGGGTGCCG CTGAACGAGG CCGACGGCTT TGGCGACAGC
CAGGTCGCCG ACCCGCTGAA CACCCGCTAC GTCGAGGTCT ATCGCGGCGG CAACGCCCTG
CGCTTCGGCG GGGCCCTGCT GGGCGGGGCG ATCAACATGG TCACGCCCAC GGGCAAGGAC
GCCGGGTTCG ACAATCAGGT TCGCGTGGAC GGCGGCTCCT ACGGCCTGCT GCGCGAGCAC
GTCGCCATCG CCCGCCAGTC TGGAGATGGG GCCGGCGACT GGGACGTCTA TGCCGCCGCC
ACCAACCAGA CCGGCCAGGG CTGGCGCTCG CAGAGCCAGC AGAACATCCA GTTCGGCAGC
CTCAATATTG GGCGATCGTT CGGCGAGGGG CGCGAGGTCC GCTTCATCGT CAACGGCTCG
AACATCAATC AGGAGATCCC CGGTTCGCTG ACGCTGGACC AGTTCAACCG GAACCCGCGC
CAGACCGCCT TGGGCAACGC CAACGGCGAC CAGGGCCGAA ACCAGCGCGG CGTGCGCGGC
TCCTTGGGAA CGACCTGGCG GCTCGGCGAC AATCTAGTCT TCCAGGGCGC GGTCTATGCG
GTGTGGAAGG ACCTGGACCA CCCGATCTTC CAGGTCATCG ACCAGCAGAG CCGCAACTAC
GGCGCCTTCG GCCGCTTCGA CTGGGAGGGC CAGATCGGCG GCAAGCGGGC CGACGCCTTC
TTCGGCGCCT GGTACCGCAC CGGCGACATG GACTCCAACT TCTACGCCAA TGTCCGCGGC
GCCCGCGGCG CGCCCATGTC GCGGACCCTG CAGAACGCCA AGGCCATGGA TGTGTTCGGC
GAAGGGCGCC TGTTCGTCAC CGACCGCCTG GCCGTGGTGG CCGGCGCGAC CTGGGGCCAG
GCCGAGCGCG ACTACACCAG CTTCGCCGTT CCGGGCGTGG CGAGCACGTT CAACCTGAAG
GCCGACAAGA CCTACAACTG GGTGTCGCCG CGCATCGGCC TGCTCTGGCA GGGCGAGGCG
GGCGACCAGC TGTTCGCCAA CCTGACCCGC TCGGTCGAGC CGCCGAACTT CAGCTCGATG
ACGCCGACCA ACACCGGCTT CACGCCGGTC CGCGCCCAGA AGGCCTGGAC CGGCGAGTTC
GGGGCGCGCG GCCACAAGGG TCCGTTCACC TACGACGTCA CGCTGTACCG CGCCGATCTG
AAGGACGAGA TGCTGCAATA TGCGGTGAGT TCGTCCATCC CGGCCTCGAC CTTCAACGCC
GACAAGACGG TTCATCAAGG CATCGAGGCG GCGCTGGACT GGACCGTGGC CCCACATTGG
CGCCTCCGCC AGACCTGGAC GCTTTCGGAC TTCCGCTTCA AGGACGACGT CCAGTTCGGC
GACAATCGCC TGCCGATCGT GCCCCGGACC TTCTACCGCT CGGAAGTGCG CTACGACGAC
CCGCGCGGCT GGTTCGTGGC CCCGTCGGTC GAGTGGTCGG CGAGCGATCA GTGGATCGAC
TACGCCACCA CCAAAAAGGC GCCGGGCTAT GCGATCCTGA ACCTGAACGC CGGCTGGAAG
GTCAGCGACC AGGTTTCGCT GTTCCTCGAT GCGCGCAACC TGGCGGACAA GGCCTATGTG
TCCAACACCC AGGCCGCCGT CACCTGGACC CCGACAACCG CCACGCTGTG GCCGGGAGAC
GGCCGGTCGG TGTTCGGCGG CGTCACGGTC GATTTCTGA
|
|---|
| Protein sequence | MSKSFRLGLM AGATFCLLSS AAHGANSAAD ADQRAIVDSV IVTARANPED PPVVAAARRR
LSETPGGVSV ISQESYIDRQ TLALDDMLRD APGVYAQRKW GGDIRISIRG SGIGNANHNR
GLLIAQDGVP LNEADGFGDS QVADPLNTRY VEVYRGGNAL RFGGALLGGA INMVTPTGKD
AGFDNQVRVD GGSYGLLREH VAIARQSGDG AGDWDVYAAA TNQTGQGWRS QSQQNIQFGS
LNIGRSFGEG REVRFIVNGS NINQEIPGSL TLDQFNRNPR QTALGNANGD QGRNQRGVRG
SLGTTWRLGD NLVFQGAVYA VWKDLDHPIF QVIDQQSRNY GAFGRFDWEG QIGGKRADAF
FGAWYRTGDM DSNFYANVRG ARGAPMSRTL QNAKAMDVFG EGRLFVTDRL AVVAGATWGQ
AERDYTSFAV PGVASTFNLK ADKTYNWVSP RIGLLWQGEA GDQLFANLTR SVEPPNFSSM
TPTNTGFTPV RAQKAWTGEF GARGHKGPFT YDVTLYRADL KDEMLQYAVS SSIPASTFNA
DKTVHQGIEA ALDWTVAPHW RLRQTWTLSD FRFKDDVQFG DNRLPIVPRT FYRSEVRYDD
PRGWFVAPSV EWSASDQWID YATTKKAPGY AILNLNAGWK VSDQVSLFLD ARNLADKAYV
SNTQAAVTWT PTTATLWPGD GRSVFGGVTV DF
|
|---|
| |