Gene Caul_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4663 
Symbol 
ID5902125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5041201 
End bp5042373 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID641565182 
ProductABC-2 type transporter 
Protein accessionYP_001686281 
Protein GI167648618 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000515456 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC AGGATCGAAA GGGAAGGGGC CTGGATGACG GACTCTCGCT GAACCGCATC 
CTGGCCGTGC TGACCAAGGA GTTCATCCAG CTCACCCGCG ACAGGCTGAC CTATGCGATG
ATCCTGGTCA TGCCGATCGT CCAGCTGATG CTGTTCGGCT ACGCCATCAA CAACGACCCG
CGCGACCTGC CGACGGCGGT TCTCGTGCAG GACCACGGCC CGATGGCCCG CTCGACCCTC
TCGGCCCTGG CCAACAGCGG CTATTTCAAG ATCGTCCACG AAGCCGCCTC GCCCGAGGCG
CTCGATCGGG CGATCGCGCG CGGCGAGGTG CAGTTCGCCC TGACCATTCC CTCCGACTTC
ACGCGCCGGG TGGTGCGCGG CGACGCGGCG CAGATCCTGG TCGAGGCCGA CGCCTCCGAT
CCGGCCGCGA CGGGCGGGGC GATCGCGGCC CTGGCCAATC TTCCGCGTAC GGCGCTTTCC
CGCGACCTGG TCGGCGCCGT TGGCCAGGTC GACCGCGACC CGTTCGAGGT GGTGATCCAC
CGGCGCTACA ATCCCGAGGC CATCACCGCC TACAATATCG TGCCCGGCCT GCTGGGGGTG
ATCCTGTCGA TGACCCTGGT GATGATGACC TCGCTGGGCG TCACCCGCGA ATACGAGCGC
GGCACGATGG AGAGCCTGCT GGCCACCCCG GCCAAGCCGA TCGAGGTGAT GATCGGCAAG
CTGGCGCCCT ATGTGGTGGT GGGTCTGATC CAGACGGTGG TGATCCTGGT CCTGGCGCGC
GCCCTGTTCG CGGTGCCAAT GGGCGGGGGC GGCGTCGCGG GCTGGGGCGC GCTGGCGCTG
GGCGTGGTGC TGTTCATCGT CGGTTCGCTG TCGTTGGGCT TTCTCATCTC GACGGCGGCG
CGCACCCAGC TGCAGGCGAT GCAGATGTCG TTCTTCTACA TCATGCCCTC GATCCTGCTG
TCGGGGTTCA TGTTCCCGTT CCGAGGCATG CCGGGCTGGG CGCAGGCCCT GGGCAGCGTC
ATTCCGGTCA CTCATTTCCT GCGCGTGGTG CGCGGCGCTT TACTCAAGGG GATAGGTGTT
CAGGACCTGT GGACCAGTCT TCTTGCTCTA GCGGTATTTG TGGTGGCCAT CGCCGCCGCC
GCCATGTCGC GTTATCGGCG GACCCTGGAC TGA
 
Protein sequence
MSAQDRKGRG LDDGLSLNRI LAVLTKEFIQ LTRDRLTYAM ILVMPIVQLM LFGYAINNDP 
RDLPTAVLVQ DHGPMARSTL SALANSGYFK IVHEAASPEA LDRAIARGEV QFALTIPSDF
TRRVVRGDAA QILVEADASD PAATGGAIAA LANLPRTALS RDLVGAVGQV DRDPFEVVIH
RRYNPEAITA YNIVPGLLGV ILSMTLVMMT SLGVTREYER GTMESLLATP AKPIEVMIGK
LAPYVVVGLI QTVVILVLAR ALFAVPMGGG GVAGWGALAL GVVLFIVGSL SLGFLISTAA
RTQLQAMQMS FFYIMPSILL SGFMFPFRGM PGWAQALGSV IPVTHFLRVV RGALLKGIGV
QDLWTSLLAL AVFVVAIAAA AMSRYRRTLD