| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4653 |
|---|
| Symbol | |
|---|
| ID | 5902115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5029092 |
|---|
| End bp | 5030348 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641565172 |
|---|
| Product | polyhydroxyalkanoate depolymerase, intracellular |
|---|
| Protein accession | YP_001686271 |
|---|
| Protein GI | 167648608 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
|---|
| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.35575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACG CTCTGCACGA GGCCAGTTTC TACGCCTCAA CGCCCCTTCG CCTGACGGCC
CGAGCGGCCC GCGACTTCTG GGGCTCGCCC CTGAACCCGG CCGCGGAAAG CGATCTTGGC
CGACGCATCC ACGCGGGCGC GAACCTGTTC TCGAACGTCA CACGCCGCTA CGGCAAGCCC
GATTGGCGCA TCGAAACGGT CAAGGTCGGC CAGGTCGATG TTCGCGTGCG GCCGACCGTG
GTCTGGGAAA GCCCCTGGGC GCGGCTGATC CAGTTCGACC GCGACATGTC CGACATGCGC
CGGGCCGGCA AGTTCCAGCT GGATCCGGCG GTGCTGATCG TCGCGCCCCT CTCCGGTCAC
TACGCGACCC TGTTGCGGGG CACGGTCGAA GCCTTCCTGC CCGACCACGC GGTGTTCATC
GTCGACTGGG TCAACGCCCG CGAGGTCTCG GTGCTCGAGG GCCGCTTTGA CTTCCACGAC
TATATCGACC ACATCCGCCA GATGCTGGCG GTGCTGGGTC CGCGTCCCAA TGTGGTGGCC
GTCTGCCAGC CGGGGCCGCC GGTCCTGGCC GCCGCCGCCC TGATGGCCGA GGACAACGAT
CCCTCGCGTC CGGCCAGCAT GACCTTCATG GGCTCGCCGA TCGACGCGCG CCTGTCGCCC
ACCGTGACCA ACAACCTGGC CGAGGAAAAG CCCTTCGCCT GGTTCCAGTC GAACATGATC
TACACCGTGC CCCCGCCCTA TCCGGGCATG GGCCGGCGCG TCTATCCGGG CTTCGTGCAA
CTGGCCAGCT TCATGAGCAT GAACGCCCAG AAGCACCAGG ACGCGCACAA ACGCTACTTC
CAGGACCTGA TCAAGGGCGA CGGCGACAGC GCCGACAAGC ACCTGGAATT CTACGACGAG
TACCTGTCGG TGCTCGACCT GACCGAGGAA TTCTACCTGC AGACCATCGA CATCGTCTTC
CAGCAGCACC TGCTGCCGAA GGGCGAGCTG ATGCATCGCG GCCGCCTGGT GCGGCCCGAC
CTGATCACCG ACATCGGCCT GATGACGGTC GAGGGCGAGA ACGACGACAT CTCCGGCATC
GGCCAGACCC AGGCGGCGCA CGCCCTGTGC TCGGGCCTGT CGGACGACCA GAAGGAAGAC
TACGTCCAGC CGAACGTCGG CCACTATGGC GTGTTCAACG GTCGGCGGTT CCGCGAGGAG
ATCTATCCGC GGGTGCGGGA CTTCATCCGC AAGAGTGATC CGAACTTCCA GAGCTGA
|
|---|
| Protein sequence | MLYALHEASF YASTPLRLTA RAARDFWGSP LNPAAESDLG RRIHAGANLF SNVTRRYGKP
DWRIETVKVG QVDVRVRPTV VWESPWARLI QFDRDMSDMR RAGKFQLDPA VLIVAPLSGH
YATLLRGTVE AFLPDHAVFI VDWVNAREVS VLEGRFDFHD YIDHIRQMLA VLGPRPNVVA
VCQPGPPVLA AAALMAEDND PSRPASMTFM GSPIDARLSP TVTNNLAEEK PFAWFQSNMI
YTVPPPYPGM GRRVYPGFVQ LASFMSMNAQ KHQDAHKRYF QDLIKGDGDS ADKHLEFYDE
YLSVLDLTEE FYLQTIDIVF QQHLLPKGEL MHRGRLVRPD LITDIGLMTV EGENDDISGI
GQTQAAHALC SGLSDDQKED YVQPNVGHYG VFNGRRFREE IYPRVRDFIR KSDPNFQS
|
|---|
| |