Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4644 |
Symbol | |
ID | 5902106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 5021226 |
End bp | 5023175 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641565163 |
Product | AsmA family protein |
Protein accession | YP_001686262 |
Protein GI | 167648599 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0752121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCTTCG ACTGGAACTG GTTTCGCGGG CCGGTCGGCC GCATGGCTTC GGCGCGCCTG AACCGCCAGG TGGTGATCAC CGGTGATCTG CGCGTCCATC CCTGGTCGTT CTCGCCGAAG GTCGAGGCCT ATGGCGTGCG CATCGCCCAG CCGGACTGGG CGGCCAAGGC CGACCCCAAG GGTTCGGCGG CCGGGTCGCA GATGGCCAAG GTCGATCGCA TCGCCGTGCA GATCAGGATC CTGCCGCTGC TGAAGGGCGA GGTGATCCTG CCGCTGCTGG CCATCGACCG TCCCGACGTG CGCTTGCTGC GCGACGCCTC TGGCCGCGCC AACTGGACGT TCGGCGATCC CAACGCCCCC AAGACGCCGC TGAAGCTGCC GGCGATCCAG CACTTCATCA TCAATGACGG CCAACTTCGC TACGAAGACC AGCAGCGCGA CGTCTTCTTC CTGGGCTCGG TCAGCTCCAA CGAGCACGCC ACCACCGATG GCCGCGGCAA GTTCGTGCTG GAGGGCAAGG GCCAGTTGAA CCGCGCGCCG TTCACGGCCC TGGTCACCGG CGGTCCGCTG CTGAACATCT CGCCCAACCG CCCCTATCCG TTCGACGCCC AGATCGACGC CGGCTCGACC CACGTGACGG CCAAGGGCGA CATCACCAAG CCGTTCGACC TGGGCCGCTT CGAGACCCAG GTCAGCGTGT CGGGCACGGA CCTGAACCGG CTCTACGCCC TGACCGGCCT GGCCCTGCCC AACACCCCGC CCTACAAGAT CAGCGGCCAC CTGTCCCGCA AGGGCGAGCG GTTCGACTTC AACAAGCTGA CCGGCCGGGT CGGCGACAGC GACGTCTCCG GCGACCTGTT CGTGCTGATG GGCAAGGCGC GGCCCTATCT GGAAGCCGAC CTGCAGTCGC AGCGGCTGGA CTTCGATGAC CTGGGCAGCC TGGTCGGCGC CGCGCCGGGC ACCGGCAAGG GCGAGACCGC CTCGGCCGGC CAGAAGGTCG AGGCCGGCAA ACGCGACGCC ACCCAGCGCC TGCTGCCCGA CGCCACCCTG CAGGTCGAGC GCGTCAAGGC CATGGACGCC AAGGTCAAGT ACCGCGCCCT GGCGGTGAAC GCCCCGAACC TGCCGCTGAA GAAGGTGCGT GCGGAGCTGA CGCTGGAAAA GGGCGTGCTG ACCCTGGATC CGATCGCCTT CACCTTCTCG CGCGGCGATC TGACCGGCAA GATACGGCTG GACGCCAATC CGGCGACCCC GCGCACCGAT CTGGACCTGC GCCTGACCAA CGCCAAGCTG GAGGACTTCA TCCCGATCCA GAGCGGCGGC AAGCCGGCGA TCGAGGGCGG GGTGATGGCC CGGGCCAAGC TGACCGGCTA CGGCAATTCC GTCCACCGCG CCGCCTCGAC CGCCAATGGA CAAGTGACGC TGGTGTCGCC CAAGGGCGAA ATCCGCCAGG CCTTCGCCGA ACTGCTGGGG GTCAACGCCT CCAAGGGCTT GATCCTGCTG CTCAGCAAGG ACAACCGTGA AACCAGCGTC CGCTGCGCCG TGGCCGACTT CACCGTCAAG GACGGGGTCA TGCGCGCCAA CCAGATCGTC GCCGACACCG GCGTGGTGCT GGCCAAGGGC AAGGGCACGA TCGACCTGCG GAGCGAGCGT CTGGACCTGA AGATCAACGG CGACAGCAAG AAGCCGCGGC TGGTCCGCCT GTTCATTCCG ATCACCATCA AGGGTCCGTT CCTGGCGCCG AAGGTGGGGC TGGACACCGG CGGAGCCTTG GCTCAGGGCG GCGCCGCCGT CGCGCTCGGC GCGCTGCTCT CGCCCTTGGC CGCCATCCTG CCCTTCGTCA CCGGCGGCGA AGCCAAGGAC GCCGACTGCG CCAGCCTGGT CGCCGAGGCC CGCGGCGACG GCGCTCCGGT CAAGGTGGCC CAGACCACCC CGGCCAAGGT GAAGAAGTAG
|
Protein sequence | MVFDWNWFRG PVGRMASARL NRQVVITGDL RVHPWSFSPK VEAYGVRIAQ PDWAAKADPK GSAAGSQMAK VDRIAVQIRI LPLLKGEVIL PLLAIDRPDV RLLRDASGRA NWTFGDPNAP KTPLKLPAIQ HFIINDGQLR YEDQQRDVFF LGSVSSNEHA TTDGRGKFVL EGKGQLNRAP FTALVTGGPL LNISPNRPYP FDAQIDAGST HVTAKGDITK PFDLGRFETQ VSVSGTDLNR LYALTGLALP NTPPYKISGH LSRKGERFDF NKLTGRVGDS DVSGDLFVLM GKARPYLEAD LQSQRLDFDD LGSLVGAAPG TGKGETASAG QKVEAGKRDA TQRLLPDATL QVERVKAMDA KVKYRALAVN APNLPLKKVR AELTLEKGVL TLDPIAFTFS RGDLTGKIRL DANPATPRTD LDLRLTNAKL EDFIPIQSGG KPAIEGGVMA RAKLTGYGNS VHRAASTANG QVTLVSPKGE IRQAFAELLG VNASKGLILL LSKDNRETSV RCAVADFTVK DGVMRANQIV ADTGVVLAKG KGTIDLRSER LDLKINGDSK KPRLVRLFIP ITIKGPFLAP KVGLDTGGAL AQGGAAVALG ALLSPLAAIL PFVTGGEAKD ADCASLVAEA RGDGAPVKVA QTTPAKVKK
|
| |