| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4620 |
|---|
| Symbol | |
|---|
| ID | 5902082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4997588 |
|---|
| End bp | 4999000 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641565139 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001686238 |
|---|
| Protein GI | 167648575 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTC CCCACCATCC TCCTTCCTAT GAAGGCGCCG TCCGCGCCTG TCCCGTCCCC
GACACGCCCG CGCCCCGCAA GCGCCTGGCC CTGGCCGCCA CCGTGCTCGG CTCGAGCCTG
GCCTTCATCG ACGGATCGGT GGTCAATGTC GCCCTGCCGG CCATGCGCAT CGCCCTGAAG
GCCGACCCCG GGCAGGTGCA GTGGATCGTC AACGCCTACC TGCTGCTGCT CGGGGCCCTG
GTGCTGATCG GCGGCTCGGC CGGCGACCGC TACGGGCGGC GCAAGATGTT CGTGCTCGGC
GTCGTGCTGT TCGCCGCCGC CTCGCTGGCC TGCGCCCTGG CCCCGGACGC CGGCTGGCTG
ATCGCCGCGC GCGCGGTGCA GGGCGTCGCC GCCGCCCTGC TGGTCCCGGC CAGCCTGGCC
ATCCTGGGCT CGACCTTCAG CGAGGCGGAA CGCGGCGGGG CGATCGGGGC CTGGGCGGGG
TTCGGGGCTG TGACCACGGC GATCGGCCCG GTGCTGGGCG GCTGGCTGGT CGACCACGTG
TCGTGGCGCG CCATCTTCCT GATCAACGTT CCGCTGGCCG TCGCCACCGT CTGGCTGGCC
CTGGCGGCCG TGCGCGAGAG CCGCGATCCG GAGGTCAAGC ACCTGGACTG GCTGGGCGCG
GTGCTGGCCG CCGCCGGCCT GGGCGCGGTG ACCTGGGGTC TGACGGCGGT GGGCGCGCGC
GGCTGGACCA GCGGCGTGAT CTGGACCGCC CTGGCGCTCG GCGTCGCCCT GCTGGCCGGC
TTCGTGGCCA GCCAGGGCCG CCAGAAGCAT CCGATGATGC CGCTGTCGCT CTATCGCTCC
AGGACCTTCA GCGGCGCCAA CCTGCTGACC CTGGCGCTGT ATTTCGGCCT GACCGGCGCC
CTGTTCTTCC TGCCGTTCGA ACTGATCGCC CGCCACGGCT ATTCGGCCGC CGCCGCCGGA
GCGACCCTGC TGCCGTTCTC GCTGGTCATG GGGGTCCTGT CGGGCGTGGC CGGCAAGCTG
TCCGACCGGT TCGGCGCCCG GCCCATGCTG ACCATCGGCC CGATCCTGGC CGGGGCCGGT
TTCGGTCTGC TCGGCGCGCC GTGGCTCGGC TCCGGCTACT GGACCGGCGT GCTGCCCGCC
GTCCTGGTGC TGGCCCTCGG CATGACCGTC GCCGTCGCGC CCCTGACCAG CACGGTGATG
GGCGCGGTCG CCCCCAGCCA CGCCGGGGTC GCCTCCGGGG TCAACAACGC CGTGGCCAGG
ATCGCCGGCC TGCTGGCCGT GGCGGTCCTG GGCCTGGTCT ATTTCGCGCC GGGTTCGGCG
GGCTATCCCC GAGTGATGGG GATCAGCGCC CTGGCGGCGG TGGCGGCCGG GATCGTGGGG
TGGCTGATGA TCGAGAAGAA GCCGGCGCAC TGA
|
|---|
| Protein sequence | MAGPHHPPSY EGAVRACPVP DTPAPRKRLA LAATVLGSSL AFIDGSVVNV ALPAMRIALK
ADPGQVQWIV NAYLLLLGAL VLIGGSAGDR YGRRKMFVLG VVLFAAASLA CALAPDAGWL
IAARAVQGVA AALLVPASLA ILGSTFSEAE RGGAIGAWAG FGAVTTAIGP VLGGWLVDHV
SWRAIFLINV PLAVATVWLA LAAVRESRDP EVKHLDWLGA VLAAAGLGAV TWGLTAVGAR
GWTSGVIWTA LALGVALLAG FVASQGRQKH PMMPLSLYRS RTFSGANLLT LALYFGLTGA
LFFLPFELIA RHGYSAAAAG ATLLPFSLVM GVLSGVAGKL SDRFGARPML TIGPILAGAG
FGLLGAPWLG SGYWTGVLPA VLVLALGMTV AVAPLTSTVM GAVAPSHAGV ASGVNNAVAR
IAGLLAVAVL GLVYFAPGSA GYPRVMGISA LAAVAAGIVG WLMIEKKPAH
|
|---|
| |